G1632589


Basic Information

Item Value
gene id G1632589
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 48561966 ~ 48562204 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1867930
ATCTAGCTTGCCAACTTTACATATTATAGCTAAGTGAAATATCATCAGCTAGTTAACTTCATATCTATCTTGCTATCTTGATGTAAGCCTATTTATCATTGTAAATTAAAATATCATGCCCCAAATTAGTTTAAAGATAACAGCAATGGAAGAGGGTGAAAGGATTTTCTGCTCCAGTTGTCAGAAAAAGGAGTAGGTGTACTAGTTAGATTGTGGGATGACATTAGGCAGATTGTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1867930 True 239 lncRNA 0.35 1 48561966 48562204

Neighbor

gene id symbol gene type direction distance location
LOC118941486 NA coding upstream 395222 48160753 ~ 48166744 (+)
LOC110498044 LOC106575475 coding upstream 432586 48122225 ~ 48129380 (+)
LOC110498040 LOC106575182 coding upstream 450319 48008094 ~ 48111647 (+)
LOC110498039 LOC106575636 coding upstream 580660 47938145 ~ 47981306 (+)
LOC110498042 icef1 coding upstream 624015 47861863 ~ 47937951 (+)
LOC110498046 LOC106574720 coding downstream 26740 48588944 ~ 48678169 (+)
LOC110498051 NA coding downstream 225015 48787219 ~ 48792402 (+)
LOC110498053 erich1 coding downstream 567466 49129670 ~ 49155002 (+)
zgc:193593 NA coding downstream 598501 49160705 ~ 49178402 (+)
si:ch211-195o20.7 LOC106574021 coding downstream 609246 49171450 ~ 49192439 (+)
G1632552 NA non-coding upstream 61166 48500555 ~ 48500800 (+)
G1632550 NA non-coding upstream 64344 48497404 ~ 48497622 (+)
G1632537 NA non-coding upstream 83374 48478367 ~ 48478592 (+)
G1632536 NA non-coding upstream 85002 48476731 ~ 48476964 (+)
G1632531 NA non-coding upstream 90595 48471080 ~ 48471371 (+)
G1632592 NA non-coding downstream 6486 48568690 ~ 48568913 (+)
G1632594 NA non-coding downstream 9966 48572170 ~ 48572433 (+)
G1632595 NA non-coding downstream 10295 48572499 ~ 48572813 (+)
LOC110498372 LOC106575065 non-coding downstream 19618 48251112 ~ 48583066 (+)
G1632597 NA non-coding downstream 22546 48584750 ~ 48584964 (+)
G1631844 NA other upstream 812884 47747697 ~ 47749082 (+)
G1631702 NA other upstream 900731 47660126 ~ 47661235 (+)
LOC110498004 LOC106580093 other upstream 2302318 46257919 ~ 46318609 (+)
G1629912 NA other upstream 2336146 46225382 ~ 46225820 (+)
G1632650 arhgef10 other downstream 136853 48699057 ~ 48700568 (+)
LOC110498072 NA other downstream 1601635 50163645 ~ 50168749 (+)

Expression


Co-expression Network