G1633963


Basic Information

Item Value
gene id G1633963
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 49529128 ~ 49529920 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1869447
AAGAAACAGGCCCTGCTGGAGTCGTCCCGCTCCACCCAGAAGAAACAGGCCCTGCTGGAGTCAGTGGCCTGCCGAGAGGGAGACTGCTTAAACACACAGTGCCTCAAACTGGTTTAGAGGGAACATGGGAGGTATGGGACCCCTGTAGGTCACTATTAAGATTGGAACAAAACAATTGCCAGCACAGGGGCCCATCAGGAGGATAGTCCTAGTCTTGAGTTCATAAGACTAAACAACATAGCCATTACCCTGCCTGTActccactgacatacAGTACAAGGTTTTTAGACGAGGGAGACGTTTCACATTCCTGTGTGATTAAGACCGGAATACATCATCAACCTGAAATCATGTTACTTCCCCCCAGATCTGTGACTTCGTCCCGTAAAATCAACCACGGCTCTTCTGTACCTTTTCAATTGAGTGTGACTTGGCTCAGGATACACCCCTCTCCACAAAACAAAAGTAAAATAGATATGTAATCATTTAAAACTGTACATATTATAAGTAGGG

Function

NR:

description
trafficking protein particle complex subunit 12

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1869447 True 513 lncRNA 0.46 2 49529128 49529920

Neighbor

gene id symbol gene type direction distance location
LOC110498061 LOC106573499 coding downstream 5763 49475673 ~ 49523365 (-)
LOC110498060 LOC106573624 coding downstream 59139 49465157 ~ 49469989 (-)
LOC110498059 LOC106573685 coding downstream 68368 49457082 ~ 49460760 (-)
LOC110498058 LOC106573748 coding downstream 73721 49366907 ~ 49455407 (-)
LOC110498375 dlgap2 coding downstream 632826 48812312 ~ 48896302 (-)
LOC118941488 NA coding upstream 1005 49530925 ~ 49532277 (-)
LOC110498062 NA coding upstream 4568 49534488 ~ 49565777 (-)
LOC110498070 LOC106572824 coding upstream 542610 50072530 ~ 50100878 (-)
LOC110498073 NA coding upstream 660737 50190657 ~ 50193142 (-)
LOC110498074 NA coding upstream 669959 50199879 ~ 50201465 (-)
G1633975 NA non-coding downstream 22471 49506375 ~ 49506657 (-)
G1633967 NA non-coding downstream 44472 49484367 ~ 49484656 (-)
G1633966 NA non-coding downstream 44847 49483862 ~ 49484281 (-)
G1633957 NA non-coding downstream 55271 49473468 ~ 49473857 (-)
G1633956 NA non-coding downstream 55937 49472902 ~ 49473191 (-)
G1633987 NA non-coding upstream 21050 49550970 ~ 49551735 (-)
G1633988 NA non-coding upstream 21946 49551866 ~ 49552233 (-)
G1634011 NA non-coding upstream 62578 49592498 ~ 49596634 (-)
G1634017 tssc1 non-coding upstream 78167 49608087 ~ 49610909 (-)
G1634063 NA non-coding upstream 166283 49696203 ~ 49720611 (-)
LOC110498045 LOC106575475 other downstream 1381958 48111907 ~ 48147170 (-)
G1632192 LOC106575636 other downstream 1548662 47916295 ~ 47980466 (-)
G1633961 NA other upstream 29117 49559037 ~ 49560131 (-)
G1634391 NA other upstream 225791 49755711 ~ 49827902 (-)
G1634769 LOC106571989 other upstream 779790 50309710 ~ 50309971 (-)
LOC110498079 LOC106571863 other upstream 905884 50378118 ~ 50465911 (-)

Expression


Co-expression Network