Gene
RNA
| Item | Value |
|---|---|
| gene id | G1633987 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 49550970 ~ 49551735 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: trafficking protein particle complex subunit 12 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1869474 | True | 766 | lncRNA | 0.51 | 1 | 49550970 | 49551735 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941488 | NA | coding | downstream | 18693 | 49530925 ~ 49532277 (-) |
| LOC110498061 | LOC106573499 | coding | downstream | 27605 | 49475673 ~ 49523365 (-) |
| LOC110498060 | LOC106573624 | coding | downstream | 80981 | 49465157 ~ 49469989 (-) |
| LOC110498059 | LOC106573685 | coding | downstream | 90210 | 49457082 ~ 49460760 (-) |
| LOC110498058 | LOC106573748 | coding | downstream | 95563 | 49366907 ~ 49455407 (-) |
| LOC110498070 | LOC106572824 | coding | upstream | 520795 | 50072530 ~ 50100878 (-) |
| LOC110498073 | NA | coding | upstream | 638922 | 50190657 ~ 50193142 (-) |
| LOC110498074 | NA | coding | upstream | 648144 | 50199879 ~ 50201465 (-) |
| LOC110498075 | LOC106572210 | coding | upstream | 668462 | 50220197 ~ 50243409 (-) |
| LOC110498378 | LOC106572116 | coding | upstream | 783547 | 50335282 ~ 50342425 (-) |
| G1633963 | NA | non-coding | downstream | 21050 | 49529128 ~ 49529920 (-) |
| G1633975 | NA | non-coding | downstream | 44313 | 49506375 ~ 49506657 (-) |
| G1633967 | NA | non-coding | downstream | 66314 | 49484367 ~ 49484656 (-) |
| G1633966 | NA | non-coding | downstream | 66689 | 49483862 ~ 49484281 (-) |
| G1633957 | NA | non-coding | downstream | 77113 | 49473468 ~ 49473857 (-) |
| G1633988 | NA | non-coding | upstream | 131 | 49551866 ~ 49552233 (-) |
| G1634011 | NA | non-coding | upstream | 40763 | 49592498 ~ 49596634 (-) |
| G1634017 | tssc1 | non-coding | upstream | 56352 | 49608087 ~ 49610909 (-) |
| G1634063 | NA | non-coding | upstream | 144468 | 49696203 ~ 49720611 (-) |
| G1634068 | NA | non-coding | upstream | 150223 | 49701958 ~ 49702397 (-) |
| LOC110498375 | dlgap2 | other | downstream | 655004 | 48812312 ~ 48896302 (-) |
| LOC110498045 | LOC106575475 | other | downstream | 1403800 | 48111907 ~ 48147170 (-) |
| G1632192 | LOC106575636 | other | downstream | 1570504 | 47916295 ~ 47980466 (-) |
| G1633961 | NA | other | upstream | 7302 | 49559037 ~ 49560131 (-) |
| G1634391 | NA | other | upstream | 203976 | 49755711 ~ 49827902 (-) |
| G1634769 | LOC106571989 | other | upstream | 757975 | 50309710 ~ 50309971 (-) |
| LOC110498079 | LOC106571863 | other | upstream | 884069 | 50378118 ~ 50465911 (-) |
