G1633988



Basic Information


Item Value
gene id G1633988
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 49551866 ~ 49552233 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1869475
GTGACCATTGCGCCTGTGTGAGGTGCTGCGGTTGAAGGCCATGTCTTTTAGGGTTGTGGGTTGTGGTGGACCAGGTAGATgttaggttttgaggcacagttaGAGGAAATGCTTGCGTTTACCTGCTGTATGGTAGCAGGATGAacgtcttttcgtggtagcagggcgGGGAAGTAAATAAATGTTGTGTTTAAATCACTCCTTGTGTGCTGTGGTAACCCCTTTCCTGCTGTGATCTCACATAGTTTGTGCCTGTGTGAATGTGGCTGGGGGACCCTAGTTGGTCCTTAGATAGCAAGTTTAGGGCATGCTGGGTGCTTGGGCACCAGAGTTTAGCCACTTCTTGTTTCTTCTATCTATTTCCCATT

Function


NR:

description
uncharacterized protein LOC111191356

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1869475 True 368 lncRNA 0.48 1 49551866 49552233

Neighbor


gene id symbol gene type direction distance location
LOC118941488 NA coding downstream 19589 49530925 ~ 49532277 (-)
LOC110498061 LOC106573499 coding downstream 28501 49475673 ~ 49523365 (-)
LOC110498060 LOC106573624 coding downstream 81877 49465157 ~ 49469989 (-)
LOC110498059 LOC106573685 coding downstream 91106 49457082 ~ 49460760 (-)
LOC110498058 LOC106573748 coding downstream 96459 49366907 ~ 49455407 (-)
LOC110498070 LOC106572824 coding upstream 520297 50072530 ~ 50100878 (-)
LOC110498073 NA coding upstream 638424 50190657 ~ 50193142 (-)
LOC110498074 NA coding upstream 647646 50199879 ~ 50201465 (-)
LOC110498075 LOC106572210 coding upstream 667964 50220197 ~ 50243409 (-)
LOC110498378 LOC106572116 coding upstream 783049 50335282 ~ 50342425 (-)
G1633987 NA non-coding downstream 131 49550970 ~ 49551735 (-)
G1633963 NA non-coding downstream 21946 49529128 ~ 49529920 (-)
G1633975 NA non-coding downstream 45209 49506375 ~ 49506657 (-)
G1633967 NA non-coding downstream 67210 49484367 ~ 49484656 (-)
G1633966 NA non-coding downstream 67585 49483862 ~ 49484281 (-)
G1634011 NA non-coding upstream 40265 49592498 ~ 49596634 (-)
G1634017 tssc1 non-coding upstream 55854 49608087 ~ 49610909 (-)
G1634063 NA non-coding upstream 143970 49696203 ~ 49720611 (-)
G1634068 NA non-coding upstream 149725 49701958 ~ 49702397 (-)
G1634373 NA non-coding upstream 177220 49729453 ~ 49729695 (-)
LOC110498375 dlgap2 other downstream 655900 48812312 ~ 48896302 (-)
LOC110498045 LOC106575475 other downstream 1404696 48111907 ~ 48147170 (-)
G1632192 LOC106575636 other downstream 1571400 47916295 ~ 47980466 (-)
G1633961 NA other upstream 6804 49559037 ~ 49560131 (-)
G1634391 NA other upstream 203478 49755711 ~ 49827902 (-)
G1634769 LOC106571989 other upstream 757477 50309710 ~ 50309971 (-)
LOC110498079 LOC106571863 other upstream 883571 50378118 ~ 50465911 (-)

Expression



Co-expression Network