G1633172


Basic Information

Item Value
gene id G1633172
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 49557427 ~ 49558028 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1868559
TAACATCATCATATAGGCTATACcctcactgtatctgtgagctgctgGCTGGAGAGcacgtgccaataccagagtgggaaCACATGCTATATAATGCAACATTTTGCTATATAAGGAAAAACAATGTGAGAAAACCATCAGAAGAGCTGAAAATGCAacggaaacccatttaacttgtcttttttattcggtacatgggaatcTAAGCtcaaaagttatttttatgtgctCTATGTCATTAAGCACAGCCTTTGTCTTCGGTGCTTATTGTTCTTATGCAGATTTGAGAATAATTCCTTCAAAATtggttgccaattggatggaaacgtaGCTAGTGAAAGACATCCTTTCTCTCAGTcaaatgttctgtttccatcTCTTCTTCCCTTGCTCTCCCTCACGtacacactctccctccccctcacccctttGCCAGGGGTGCCTCTAAATCTTCATTAGGGGGTGAAATGAAGCCGAAAACGAGAGGCGGGGAGACGGCCAGAAGCAGCTGCATCCACTGAGACAGAACCCACAGCCCCCACAACAGCAACACTTCCTCACCCCCTCCCTATATTTGGCTCTGGCACTCACTGGGGATAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1868559 True 602 lncRNA 0.45 1 49557427 49558028

Neighbor

gene id symbol gene type direction distance location
LOC110498056 LOC106573945 coding upstream 338872 49200093 ~ 49218555 (+)
si:ch211-195o20.7 LOC106574021 coding upstream 364988 49171450 ~ 49192439 (+)
zgc:193593 NA coding upstream 389881 49160705 ~ 49178402 (+)
LOC110498053 erich1 coding upstream 402425 49129670 ~ 49155002 (+)
LOC110498051 NA coding upstream 765025 48787219 ~ 48792402 (+)
LOC110498063 LOC106573328 coding downstream 7828 49565856 ~ 49611711 (+)
LOC110498066 LOC106573019 coding downstream 196940 49754968 ~ 49926745 (+)
LOC110498067 LOC106572928 coding downstream 369676 49927704 ~ 50024509 (+)
zgc:113142 LOC106570820 coding downstream 479737 50037765 ~ 50068382 (+)
LOC110498069 LOC106572557 coding downstream 530238 50088266 ~ 50144649 (+)
G1633171 NA non-coding upstream 273 49556625 ~ 49557154 (+)
G1633170 NA non-coding upstream 1373 49555511 ~ 49556054 (+)
G1633169 NA non-coding upstream 2077 49555021 ~ 49555350 (+)
G1633168 NA non-coding upstream 2447 49554626 ~ 49554980 (+)
G1633167 NA non-coding upstream 3092 49554129 ~ 49554335 (+)
G1633173 NA non-coding downstream 217 49558245 ~ 49558453 (+)
G1633177 NA non-coding downstream 1117 49559145 ~ 49560057 (+)
G1633180 NA non-coding downstream 10615 49568643 ~ 49569529 (+)
G1633189 NA non-coding downstream 31863 49589891 ~ 49590170 (+)
G1633191 NA non-coding downstream 36519 49594547 ~ 49597524 (+)
G1632650 arhgef10 other upstream 856859 48699057 ~ 48700568 (+)
LOC110498046 LOC106574720 other upstream 879272 48588944 ~ 48678169 (+)
LOC110498372 LOC106575065 other upstream 977771 48251112 ~ 48583066 (+)
LOC110498044 LOC106575475 other upstream 1428047 48122225 ~ 48129380 (+)
LOC110498072 NA other downstream 605811 50163645 ~ 50168749 (+)
LOC110498078 LOC106572417 other downstream 685591 50243497 ~ 50265945 (+)
G1634948 NA other downstream 1049358 50607386 ~ 50610479 (+)
hnrnpua hnrnpu other downstream 3016905 52561723 ~ 52576154 (+)
G1637065 NA other downstream 3192572 52750600 ~ 52755474 (+)

Expression


Co-expression Network