G1633177


Basic Information

Item Value
gene id G1633177
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 49559145 ~ 49560057 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1868566
aaccacggccaccccactTTTGGATGCTCAAACAAAATGCCTGAGACACAGGGAACGAAAAGAGTCTAGCACTAGATACAccgaccacagctggtgcagggggggcctcctcctccggtacccctcggcatggcccctcccaactccatcggaacgGGAGCGGGGATGGGGAGTCCTGAGCTGGGggagccgaaggtggagagaggagaccactcctctcccatcggtccattctctccatcacctgATCCATAGCCGTTCCGATCCGATGGAGAACGGTGGTAtggtggagaacccgttcctccatcgatgggagagggttggccgctgctcctgctgactccattttaccggtgcgggattctgtaaggTCCTGGGTGTCGTGAGGGTGAAATCAGGCGCAGGAAAACAGAGAGTTCAATAAAGTGCTCCTTTAATGCACACACGgtgaaccacggccaccccacttttgggtgctcaaacaaaatgccccagacacagAGAACGAAAACAGTCTAGCACTAGATACACGAACACGTACGTCAGTAGCaaacaccagggttacaataatcaATCCCGTACAAAGAAAcgggcgggccggctgactaataaagcccaactaattacaacaaactcaaaacaggtgtaatcaataaacacataaggaggggaaGAAAAGagtcagtggcagctagtaggccggcgacgacgaccgccacctgaaagggaaggggagccaccttcggtcggagtcgtgacagggctcccgagtggcgcagcggtctaaggcactgcatctcagtgctagaggtgtcactacagacaccctggttcgaatccaggctgtatcacaaccaaccatgattgggagtcccataagggcagcgcataattggcccagcgttgtccgggt

Function

NR:

description
PREDICTED: moesin-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1868566 True 913 lncRNA 0.55 1 49559145 49560057

Neighbor

gene id symbol gene type direction distance location
LOC110498056 LOC106573945 coding upstream 340590 49200093 ~ 49218555 (+)
si:ch211-195o20.7 LOC106574021 coding upstream 366706 49171450 ~ 49192439 (+)
zgc:193593 NA coding upstream 391599 49160705 ~ 49178402 (+)
LOC110498053 erich1 coding upstream 404143 49129670 ~ 49155002 (+)
LOC110498051 NA coding upstream 766743 48787219 ~ 48792402 (+)
LOC110498063 LOC106573328 coding downstream 5799 49565856 ~ 49611711 (+)
LOC110498066 LOC106573019 coding downstream 194911 49754968 ~ 49926745 (+)
LOC110498067 LOC106572928 coding downstream 367647 49927704 ~ 50024509 (+)
zgc:113142 LOC106570820 coding downstream 477708 50037765 ~ 50068382 (+)
LOC110498069 LOC106572557 coding downstream 528209 50088266 ~ 50144649 (+)
G1633173 NA non-coding upstream 692 49558245 ~ 49558453 (+)
G1633172 NA non-coding upstream 1117 49557427 ~ 49558028 (+)
G1633171 NA non-coding upstream 1991 49556625 ~ 49557154 (+)
G1633170 NA non-coding upstream 3091 49555511 ~ 49556054 (+)
G1633169 NA non-coding upstream 3795 49555021 ~ 49555350 (+)
G1633180 NA non-coding downstream 8586 49568643 ~ 49569529 (+)
G1633189 NA non-coding downstream 29834 49589891 ~ 49590170 (+)
G1633191 NA non-coding downstream 34490 49594547 ~ 49597524 (+)
G1633192 NA non-coding downstream 36717 49596774 ~ 49598143 (+)
G1633190 NA non-coding downstream 38464 49598521 ~ 49600354 (+)
G1632650 arhgef10 other upstream 858577 48699057 ~ 48700568 (+)
LOC110498046 LOC106574720 other upstream 880990 48588944 ~ 48678169 (+)
LOC110498372 LOC106575065 other upstream 979489 48251112 ~ 48583066 (+)
LOC110498044 LOC106575475 other upstream 1429765 48122225 ~ 48129380 (+)
LOC110498072 NA other downstream 603782 50163645 ~ 50168749 (+)
LOC110498078 LOC106572417 other downstream 683562 50243497 ~ 50265945 (+)
G1634948 NA other downstream 1047329 50607386 ~ 50610479 (+)
hnrnpua hnrnpu other downstream 3014876 52561723 ~ 52576154 (+)
G1637065 NA other downstream 3190543 52750600 ~ 52755474 (+)

Expression


Co-expression Network