G1633190


Basic Information

Item Value
gene id G1633190
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 49598521 ~ 49600354 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1868580
CGTGTGTTGTGAGCGCGCGCGTGTGTTGTGAGTGCGCGCGTGTGTTGTGAGTGCGCGCGTGTGTTGTGAGTGCGCGCGTGTGTTGTGAGCGCGCGCGTGTGTTGTGAGTGCGCGCGTGTGTTATGAGCGAGTGCCCGTGTTGTGAGCCAGCGCCCGTGTTGTGAGCGAGCGCTTGTGAGGGCTTTTGTGTGTGAGGGCGTTTGTGtgggtttgtgagtgtgtgtttgtgtgagtgtgcgtgagcgtgcgtgcgtgagtgtgttttTAAATGAGCGTGAGTGCTCTATTGCTAGCTGGGGCTGTCATAGGGGATGTTCTCTCAGTACATCAATCCCAAACCCTGTTTGCACCCACATTCCGCAGTGAGAGGGCAGCACACACACCGTCAGCTGTGTGACAACTGTCAGGCCTCCGCAACATGCACCACAGTatgcatacagaaacacacaccgtCAGCTGTGTGACAACTGTCAGGCCTCCGCAACATGCACCACAGGatgcatacagaaacacacaccgtCAGCTGTGTGACAACTGTCAGGCCTCCGCAACATGCACCACAGGatgcatacagaaacacacaccgtCAGCTGTGTGACAACTGTCAGGCCTCCGCAACATGCACCACAGTatgcatacagaaacacacaccgtCAGCTGTGTGACAACTGTCAGGCCTCCGCAACATGCACCACAGTatgcatacagaaacacacaccgtCAGCTGTGTGACAACTGTCAGGCCTCCGCAACATGCACCACAGTATGCATACAGAAACACAATGCAGTGCTGCAGTCAAGCTGGCCTCTCTAgtttctctgtactgtacagtagcacACAGTACTgtgggtaacactttacttgacgcCCAGCATTATAACAcgttatgacacggtcataaccatgtcctaatatgtcataacagctgtcataacctgttataatatggtcataacactgtcatgacatatttagacctgttgtgacatataatgtgttattttatatatttttatgacCCCTACATGAGTGTAAAATCCCTGGACAACAAAAGAAGGTATGAAAACCAATaaaacaggagagaaatggcaaATGAGGAAGTATTTCATAGGCAGCAAAATGCCAAGCTGATTATTGAGTTGAGGCTGTCAGTGAAAGCATCTAAAATATGTGTGACGATAATGTGTCTTCAGTATAATTTTAAGATGTttagactagaggtcgactgattatgatttttcaacgccgataccgattattggaggatcaaaaaaagccgataccgattaatcaaccg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1868580 True 1298 lncRNA 0.48 3 49598521 49600354

Neighbor

gene id symbol gene type direction distance location
LOC110498056 LOC106573945 coding upstream 379966 49200093 ~ 49218555 (+)
si:ch211-195o20.7 LOC106574021 coding upstream 406082 49171450 ~ 49192439 (+)
zgc:193593 NA coding upstream 430975 49160705 ~ 49178402 (+)
LOC110498053 erich1 coding upstream 443519 49129670 ~ 49155002 (+)
LOC110498051 NA coding upstream 806119 48787219 ~ 48792402 (+)
LOC110498066 LOC106573019 coding downstream 154614 49754968 ~ 49926745 (+)
LOC110498067 LOC106572928 coding downstream 327350 49927704 ~ 50024509 (+)
zgc:113142 LOC106570820 coding downstream 437411 50037765 ~ 50068382 (+)
LOC110498069 LOC106572557 coding downstream 487912 50088266 ~ 50144649 (+)
LOC110498072 NA coding downstream 563291 50163645 ~ 50168749 (+)
G1633192 NA non-coding upstream 378 49596774 ~ 49598143 (+)
G1633191 NA non-coding upstream 997 49594547 ~ 49597524 (+)
G1633189 NA non-coding upstream 8351 49589891 ~ 49590170 (+)
G1633180 NA non-coding upstream 28992 49568643 ~ 49569529 (+)
G1633177 NA non-coding upstream 38464 49559145 ~ 49560057 (+)
LOC110498063 LOC106573328 non-coding downstream 7579 49565856 ~ 49611711 (+)
G1633227 NA non-coding downstream 68099 49668453 ~ 49673381 (+)
G1634098 NA non-coding downstream 151916 49752270 ~ 49753299 (+)
G1634144 NA non-coding downstream 259864 49860218 ~ 49861805 (+)
G1634175 NA non-coding downstream 330135 49930489 ~ 49930872 (+)
G1632650 arhgef10 other upstream 897953 48699057 ~ 48700568 (+)
LOC110498046 LOC106574720 other upstream 920366 48588944 ~ 48678169 (+)
LOC110498372 LOC106575065 other upstream 1018865 48251112 ~ 48583066 (+)
LOC110498044 LOC106575475 other upstream 1469141 48122225 ~ 48129380 (+)
LOC110498078 LOC106572417 other downstream 643265 50243497 ~ 50265945 (+)
G1634948 NA other downstream 1007032 50607386 ~ 50610479 (+)
hnrnpua hnrnpu other downstream 2974579 52561723 ~ 52576154 (+)
G1637065 NA other downstream 3150246 52750600 ~ 52755474 (+)

Expression


Co-expression Network