Gene
RNA
| Item | Value |
|---|---|
| gene id | G1634144 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 49860218 ~ 49861805 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1869647 | False | 271 | lncRNA | 0.45 | 2 | 49860218 | 49861805 |
| TU1869648 | True | 271 | lncRNA | 0.45 | 2 | 49860218 | 49861805 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498063 | LOC106573328 | coding | upstream | 248507 | 49565856 ~ 49611711 (+) |
| LOC110498056 | LOC106573945 | coding | upstream | 641663 | 49200093 ~ 49218555 (+) |
| si:ch211-195o20.7 | LOC106574021 | coding | upstream | 667779 | 49171450 ~ 49192439 (+) |
| zgc:193593 | NA | coding | upstream | 692672 | 49160705 ~ 49178402 (+) |
| LOC110498053 | erich1 | coding | upstream | 705216 | 49129670 ~ 49155002 (+) |
| LOC110498067 | LOC106572928 | coding | downstream | 65899 | 49927704 ~ 50024509 (+) |
| zgc:113142 | LOC106570820 | coding | downstream | 175960 | 50037765 ~ 50068382 (+) |
| LOC110498069 | LOC106572557 | coding | downstream | 226461 | 50088266 ~ 50144649 (+) |
| LOC110498072 | NA | coding | downstream | 301840 | 50163645 ~ 50168749 (+) |
| iars2 | iars2 | coding | downstream | 341264 | 50203069 ~ 50219807 (+) |
| G1634098 | NA | non-coding | upstream | 106919 | 49752270 ~ 49753299 (+) |
| G1633227 | NA | non-coding | upstream | 186837 | 49668453 ~ 49673381 (+) |
| G1633190 | NA | non-coding | upstream | 259864 | 49598521 ~ 49600354 (+) |
| G1633192 | NA | non-coding | upstream | 262075 | 49596774 ~ 49598143 (+) |
| G1634175 | NA | non-coding | downstream | 68684 | 49930489 ~ 49930872 (+) |
| G1634177 | NA | non-coding | downstream | 72071 | 49933876 ~ 49934170 (+) |
| G1634178 | NA | non-coding | downstream | 72673 | 49934478 ~ 49934697 (+) |
| G1634182 | NA | non-coding | downstream | 77883 | 49939688 ~ 49940042 (+) |
| G1634184 | NA | non-coding | downstream | 80472 | 49942277 ~ 49942612 (+) |
| G1632650 | arhgef10 | other | upstream | 1159650 | 48699057 ~ 48700568 (+) |
| LOC110498046 | LOC106574720 | other | upstream | 1182063 | 48588944 ~ 48678169 (+) |
| LOC110498372 | LOC106575065 | other | upstream | 1280562 | 48251112 ~ 48583066 (+) |
| LOC110498044 | LOC106575475 | other | upstream | 1730838 | 48122225 ~ 48129380 (+) |
| LOC110498078 | LOC106572417 | other | downstream | 381814 | 50243497 ~ 50265945 (+) |
| G1634948 | NA | other | downstream | 745581 | 50607386 ~ 50610479 (+) |
| hnrnpua | hnrnpu | other | downstream | 2713128 | 52561723 ~ 52576154 (+) |
| G1637065 | NA | other | downstream | 2888795 | 52750600 ~ 52755474 (+) |
