G1634275


Basic Information

Item Value
gene id G1634275
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 50147195 ~ 50148050 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1869788
atgcgcgtgtcatgccctgaccatagagagcctttttattctctattttggttaggtcgggtgtgactagggtgggtaatctaggttgtttatttctatgttggcctggtatggttcccaatcagaggaagctgtttatcgttgtctctggttgggggatcatatttaggcagacatttccccactgtgttttgtgggatcttgtttatgtgtagttgcctgtgagcacttcaTTTACTTCACGTTTCAtttgttctttattgtttttgtgtgtttcatTCAATAAACATGTGGAACCAATATCAAAACAGGCAAGCCTTTTTTGCAAAATAATTGGGGCTCAAAATTATAAATATGCAGGTGAGCAGCCATATTGTTTTATTGTAAAAACACAGGCAATCATTCAGAACTTTGATAACTGTTTTTGGCAGAAAATCATCTCTACTTTGCATTGCTGTACAGGAGGCCAGTAAATACCTTGTTGACATTGGCAAAGAGGGATGTGGATATGAGAAAAAGTATCTTTATCAATGACCAAAATGATTTTTAGGGGTAgtattattgtcacgccctggcatTAGTATTCTGTgatttctttattatgttggttaggccagggtgtgacatgggtgatttatgtgtcttgttttgtctaggggttttgtagtctatggggttgtgttcagttgagtgttctaggtaagtctatggttgcctggagtggttctcaatcagaggcaggtgtttatcgttgtctctgattgggaaccatatttaggcagccatattctttaggtatctggtgggtgattgttcctgtctctgtgttttgcaccagttcggactgtttcggttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1869788 True 856 lncRNA 0.40 1 50147195 50148050

Neighbor

gene id symbol gene type direction distance location
LOC110498069 LOC106572557 coding upstream 2546 50088266 ~ 50144649 (+)
zgc:113142 LOC106570820 coding upstream 78813 50037765 ~ 50068382 (+)
LOC110498067 LOC106572928 coding upstream 122686 49927704 ~ 50024509 (+)
LOC110498066 LOC106573019 coding upstream 220450 49754968 ~ 49926745 (+)
LOC110498063 LOC106573328 coding upstream 535484 49565856 ~ 49611711 (+)
LOC110498072 NA coding downstream 15595 50163645 ~ 50168749 (+)
iars2 iars2 coding downstream 55019 50203069 ~ 50219807 (+)
LOC110498078 LOC106572417 coding downstream 95447 50243497 ~ 50265945 (+)
LOC110498377 LOC106571989 coding downstream 123994 50272044 ~ 50335206 (+)
LOC110498080 LOC106571921 coding downstream 209575 50357625 ~ 50378113 (+)
G1634294 NA non-coding upstream 37849 50109127 ~ 50109346 (+)
G1634293 NA non-coding upstream 38459 50108472 ~ 50108736 (+)
G1634292 NA non-coding upstream 38959 50108008 ~ 50108236 (+)
G1634280 NA non-coding upstream 54290 50092567 ~ 50092905 (+)
G1634198 NA non-coding upstream 152418 49963673 ~ 49994777 (+)
G1634301 NA non-coding downstream 354 50148404 ~ 50148668 (+)
G1634306 NA non-coding downstream 3527 50151577 ~ 50151873 (+)
G1634308 NA non-coding downstream 6040 50154090 ~ 50154328 (+)
G1634311 NA non-coding downstream 8722 50156772 ~ 50157063 (+)
zgc:193593 NA other upstream 968793 49160705 ~ 49178402 (+)
G1632650 arhgef10 other upstream 1446627 48699057 ~ 48700568 (+)
LOC110498046 LOC106574720 other upstream 1469040 48588944 ~ 48678169 (+)
LOC110498372 LOC106575065 other upstream 1567539 48251112 ~ 48583066 (+)
LOC110498044 LOC106575475 other upstream 2017815 48122225 ~ 48129380 (+)
G1634948 NA other downstream 459336 50607386 ~ 50610479 (+)
hnrnpua hnrnpu other downstream 2426883 52561723 ~ 52576154 (+)
G1637065 NA other downstream 2602550 52750600 ~ 52755474 (+)

Expression


Co-expression Network