G1634359 (LOC106572210)


Basic Information

Item Value
gene id G1634359
gene name LOC106572210
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 50238490 ~ 50241199 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1869882
TTCTAATTTGCTGTCAAAAAGGGGAAAAACCTTTTTGACAGCACTGTACCTCTACTGCTACTATAGTACCTCGacagacacaaaacacacacacagagcagtacctcgacagacacaaaacacacacacagagcagtacctcgacagacacaaaacacacacacagagcagtacctcgacagacacaaaacacacacacagagcagtaactcaacagacacaaaatacacacacagagcagtacCTCGAGCCACCTGGTTTCTGCAGGCGCGTAGAGACTGAAAGAGACTGAAGCCATCAATAGTGACCAGGGCTGCTGGGTAAAGAATGCTCAGCTCCTCatgCTGCTCGGTGACACCAGGGTGGCGGGGGATCTCGTAGGTGCGACACTTGAGCCTCAGGACAGGATCCTCATTCAACAGCTGGGCTAGGAGTAGGACCCCACTCTCTGTGTAGAAGCGAACATAACCAGATGAGAAGCCCACTACAATACAAGTCCAGTCTGGCCGACCTGTGGAactcCTTTTCTGGctggccagaggtatacagatgACACTGCTCACACTCTCCccctcctctgtGCTGAGAGTTCCACTCCAGGACACAGCCAGGGTCATCTCCTCTCGGC

Function

NR:

description
hypothetical protein cypCar_00012683

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1869882 True 628 lncRNA 0.51 5 50238490 50241199

Neighbor

gene id symbol gene type direction distance location
iars2 iars2 coding upstream 18683 50203069 ~ 50219807 (+)
LOC110498072 NA coding upstream 69741 50163645 ~ 50168749 (+)
LOC110498069 LOC106572557 coding upstream 93841 50088266 ~ 50144649 (+)
zgc:113142 LOC106570820 coding upstream 170108 50037765 ~ 50068382 (+)
LOC110498067 LOC106572928 coding upstream 213981 49927704 ~ 50024509 (+)
LOC110498078 LOC106572417 coding downstream 2298 50243497 ~ 50265945 (+)
LOC110498377 LOC106571989 coding downstream 30845 50272044 ~ 50335206 (+)
LOC110498080 LOC106571921 coding downstream 116426 50357625 ~ 50378113 (+)
LOC110498081 NA coding downstream 195499 50436698 ~ 50437783 (+)
LOC118941376 NA coding downstream 273723 50514922 ~ 50516672 (+)
G1634334 NA non-coding upstream 46301 50190679 ~ 50192189 (+)
G1634333 NA non-coding upstream 48438 50189825 ~ 50190052 (+)
G1634329 NA non-coding upstream 53342 50184915 ~ 50185148 (+)
G1634324 NA non-coding upstream 59005 50179263 ~ 50179485 (+)
G1634322 NA non-coding upstream 60436 50177262 ~ 50178054 (+)
G1634681 NA non-coding downstream 26439 50267638 ~ 50268044 (+)
G1634693 NA non-coding downstream 32404 50273603 ~ 50274264 (+)
G1634705 NA non-coding downstream 47938 50289137 ~ 50289357 (+)
G1634712 NA non-coding downstream 55636 50296835 ~ 50297054 (+)
G1634713 NA non-coding downstream 57741 50298940 ~ 50299387 (+)
zgc:193593 NA other upstream 1060088 49160705 ~ 49178402 (+)
G1632650 arhgef10 other upstream 1537922 48699057 ~ 48700568 (+)
LOC110498046 LOC106574720 other upstream 1560335 48588944 ~ 48678169 (+)
LOC110498372 LOC106575065 other upstream 1658834 48251112 ~ 48583066 (+)
G1634948 NA other downstream 366187 50607386 ~ 50610479 (+)
hnrnpua hnrnpu other downstream 2333734 52561723 ~ 52576154 (+)
G1637065 NA other downstream 2509401 52750600 ~ 52755474 (+)
G1637178 NA other downstream 2676138 52917337 ~ 52918478 (+)

Expression


Co-expression Network