G1634681


Basic Information

Item Value
gene id G1634681
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 50267638 ~ 50268044 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1870246
cgtttattgtttttgtttcagtgttcacgTTAAATatcaagatgaacacttaccacgctgcgctttggtcctctccttcatacgacgaccgttacatcaatgttgtgtgacaaaactgcacatattAGTGtagccttttattttccccagcacaagttgcacctgtgtaatgatcatgctgtttaaccagcttcttgatatgccacacctgtcaggtggatggattatcttggcaaagaagaaatgctcactaacagggatgtaaacaaatttgtgcacaaaatttcagagaaataagatttttctgcgtatggaacatttctgtgatcttttatctcagctcatgaaatatgggaccaacactttacatattgcgtttatatttttgttcagtgtaaatgtaGTAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1870246 True 407 lncRNA 0.37 1 50267638 50268044

Neighbor

gene id symbol gene type direction distance location
LOC110498078 LOC106572417 coding upstream 1693 50243497 ~ 50265945 (+)
iars2 iars2 coding upstream 47831 50203069 ~ 50219807 (+)
LOC110498072 NA coding upstream 98889 50163645 ~ 50168749 (+)
LOC110498069 LOC106572557 coding upstream 122989 50088266 ~ 50144649 (+)
zgc:113142 LOC106570820 coding upstream 199256 50037765 ~ 50068382 (+)
LOC110498377 LOC106571989 coding downstream 4000 50272044 ~ 50335206 (+)
LOC110498080 LOC106571921 coding downstream 89581 50357625 ~ 50378113 (+)
LOC110498081 NA coding downstream 168654 50436698 ~ 50437783 (+)
LOC118941376 NA coding downstream 246878 50514922 ~ 50516672 (+)
heatr4 heatr4 coding downstream 252351 50520395 ~ 50526363 (+)
G1634359 LOC106572210 non-coding upstream 26439 50238490 ~ 50241199 (+)
G1634334 NA non-coding upstream 75449 50190679 ~ 50192189 (+)
G1634333 NA non-coding upstream 77586 50189825 ~ 50190052 (+)
G1634329 NA non-coding upstream 82490 50184915 ~ 50185148 (+)
G1634324 NA non-coding upstream 88153 50179263 ~ 50179485 (+)
G1634693 NA non-coding downstream 5559 50273603 ~ 50274264 (+)
G1634705 NA non-coding downstream 21093 50289137 ~ 50289357 (+)
G1634712 NA non-coding downstream 28791 50296835 ~ 50297054 (+)
G1634713 NA non-coding downstream 30896 50298940 ~ 50299387 (+)
G1634714 NA non-coding downstream 31843 50299887 ~ 50300164 (+)
zgc:193593 NA other upstream 1089236 49160705 ~ 49178402 (+)
G1632650 arhgef10 other upstream 1567070 48699057 ~ 48700568 (+)
LOC110498046 LOC106574720 other upstream 1589483 48588944 ~ 48678169 (+)
G1634948 NA other downstream 339342 50607386 ~ 50610479 (+)
hnrnpua hnrnpu other downstream 2306889 52561723 ~ 52576154 (+)
G1637065 NA other downstream 2482556 52750600 ~ 52755474 (+)
G1637178 NA other downstream 2649293 52917337 ~ 52918478 (+)
G1637730 NA other downstream 3161960 53430004 ~ 53430560 (+)

Expression


Co-expression Network