G1634728 (LOC106586115)


Basic Information

Item Value
gene id G1634728
gene name LOC106586115
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 50322080 ~ 50322354 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1870295
gaggatgaggaCGCGGCTACGTCTCCTTGTAGGACTACTACCTCGGGCTTGGATTTTCTCTTCTTTCCTGTCCCCCTTCTTCCAGTGCATAACGTCATCTGCCGAAGCTCCTTATATAGGGGACAGTCTCTCCCGATCAATAATGGCACCTTCAGCTGGGGCACTTTCCCTGCCCTGACTGTACACCTTCCTTTTGGAGTGAGAATAGGCAGATTCACAGTGGGGTAATAGTGGGTGTCTCCATGGATACAGGATACGGCTACTTTGTCTGGTAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106586115

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1870295 True 275 lncRNA 0.51 1 50322080 50322354

Neighbor

gene id symbol gene type direction distance location
LOC110498078 LOC106572417 coding upstream 56135 50243497 ~ 50265945 (+)
iars2 iars2 coding upstream 102273 50203069 ~ 50219807 (+)
LOC110498072 NA coding upstream 153331 50163645 ~ 50168749 (+)
LOC110498069 LOC106572557 coding upstream 177431 50088266 ~ 50144649 (+)
zgc:113142 LOC106570820 coding upstream 253698 50037765 ~ 50068382 (+)
LOC110498080 LOC106571921 coding downstream 35271 50357625 ~ 50378113 (+)
LOC110498081 NA coding downstream 114344 50436698 ~ 50437783 (+)
LOC118941376 NA coding downstream 192568 50514922 ~ 50516672 (+)
heatr4 heatr4 coding downstream 198041 50520395 ~ 50526363 (+)
LOC118936464 adf1 coding downstream 204587 50526941 ~ 50529343 (+)
G1634726 NA non-coding upstream 8982 50312895 ~ 50313098 (+)
G1634725 NA non-coding upstream 9920 50311949 ~ 50312160 (+)
G1634722 NA non-coding upstream 13332 50308448 ~ 50308748 (+)
G1634718 NA non-coding upstream 17843 50303958 ~ 50304237 (+)
G1634714 NA non-coding upstream 21916 50299887 ~ 50300164 (+)
G1634729 LOC106586115 non-coding downstream 339 50322693 ~ 50322943 (+)
G1634730 NA non-coding downstream 857 50323211 ~ 50323433 (+)
G1634734 NA non-coding downstream 7728 50330082 ~ 50330362 (+)
LOC110498377 LOC106571989 non-coding downstream 10642 50272044 ~ 50335206 (+)
G1634739 NA non-coding downstream 19949 50342303 ~ 50342646 (+)
zgc:193593 NA other upstream 1143678 49160705 ~ 49178402 (+)
G1632650 arhgef10 other upstream 1621512 48699057 ~ 48700568 (+)
LOC110498046 LOC106574720 other upstream 1643925 48588944 ~ 48678169 (+)
G1634948 NA other downstream 285032 50607386 ~ 50610479 (+)
hnrnpua hnrnpu other downstream 2252579 52561723 ~ 52576154 (+)
G1637065 NA other downstream 2428246 52750600 ~ 52755474 (+)
G1637178 NA other downstream 2594983 52917337 ~ 52918478 (+)
G1637730 NA other downstream 3107650 53430004 ~ 53430560 (+)

Expression


Co-expression Network