G1634802 (LOC106571863)


Basic Information

Item Value
gene id G1634802
gene name LOC106571863
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 50378224 ~ 50380198 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1870373
TGTGGAATTTAAGCCTTGACACAATATTCAAAGGAAACCTTGTGAactaaaatgcaattgttttcaCAGACAAACATTTTTTAGGAGATTTTACCTTACCGGGTAGAATCAGGATAGGGGGTTTTCTTCACTGTAATATATAGGCTCCTATGGATCCTAAAAGAAAACACAATCCCTCAAGGTCTCAGCAGATTTACAAATCATGAGTAATAGTGAAGTTGTCAAGAGCATGACAAAACTTGTCCACCTTTAGGCTACAGTCAGAAATATCGTCAGACTTTGAGGTGGCTACAAAGTGCATCATGGAACATTATCGTGACATACCATTATTGTAACCAGTATGCTTTATTCCAGAGTAAAAAGCCTACATGTATATCAGCAACCGTACTGCTTTAACAGCTCATAACAATAATACTGAGAAATAAAAAAGTAAACGGCAAGCAAGCCCTCTagtgaaaaacacacacaaactgtttGGTATTTCATGAGAGTGCTGCCCCCTGTTGAGTGTAAGATGTACTGTAGAGTACTACATCACAAACACCAACTAGTGCTCTGGCAGACTCAATGGCAGTGATCAACTACAAGACACTTAAACATATACAAAAACACGTTATAAATTAAGTATAACTGCTACAAATGTAATGAGTTAGTACAGTTTAAATTCCAATGTCAAATAATAGCATTTCATATTTTGGTGTAGCCAAGGTGAAAGTTAGTTGTATTAAAATGTTCTGTGTTGGAACAAGATGGACAAATGACAGAGGGGCTTCTACTATCACATTCTCTGCTCTTGGTGTCTCTAAAACCCTCTTCAGTAAAGAGTGAGAACAGTCACTGTAAGAAGAAATGCATTTAGAGAGGGTAAAGTATTAGTAGACAATGCGTATAATACGGTAGAACAGACTAAAGTATTAAGAAAATAAGTGTGGAATgactaaataaaatgtaaatgctATCTACAAAATAACTATGACAATTCTAAACAAGAGATTCACTTTTGCTTATGAGCCAGATAGAGAACAGTAGATGGCACAAGTAATTATAATTGTGATCACAAGTTCATACACTCTCTCTGGTCTACTCAGTACCCATCACAGCACTTTCACACATACTTAACATCTCCTTTCTGCTTTGTCCATCACCTGCATAGGCAACCATAGCTTCCTATATGTTTTCACAGTATTGATTTAGCAGTCAATTCCAGTCATTCATTCCAGTGTATACCTAACAAGGTAATGTTATAAACAAAGAAAGGAATGGATTAACGAAAAATCCCCGAACCAGAGGAGACACTGCACATTTGAATGAATGCCAGGCATTGCAGATGACTCCAGCTAGGGCCTAGAAATCCTCTGAGGCTTGGATGTGCTTTTGTGCCAGTGACGGCCTTCTTGGGCTGTGTCACATTCCACCTCAGGAATAGAACATGCTACCTGTCTCCTGGCAAAGCAGCATCTCCTTCTGTCTTTAACTTGTTGTGTTTTCTTGCTACTGTGGACTTTCATATAAATCTCTCACCGTCTACACTAACTACAAAGCATCATCAGTAATACCAAAACTACACAATAGTGTGTTCCTGTGCATGGCCAGTGAGGTGTGGGGTCTGTTCCAGTGTTCTGCTCCGCTCCCCCAGGGGCCAGGGTTAGACAGGGGTGACACTGAGGtcctcagacagagagaagccTGAGTCTCTGTCCCGGGTGGGTTTCTCAGACTTGGTGTGTCTCCTCACATCCTCGTGTCCGTAGCTGGCGTGGCGCTTCAGTAGCAGTTTGGGCACACAGGAAGAGGCCGCACCCAGGCCTGCCCCTGAGCAGgaggagaagcaggaggagaaagaggtgCTGGGAGCACAgctggtgctggcactggtgctGGGGCATGGCTCTGGGCCTTTGGGCACCACCAGGGGCAGGCTCTCTGCCTCATAGCTCTGCTCATCGTAGGCA

Function

NR:

description
leukocyte tyrosine kinase receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1870373 True 1952 lncRNA 0.42 2 50378224 50380198

Neighbor

gene id symbol gene type direction distance location
LOC110498080 LOC106571921 coding upstream 111 50357625 ~ 50378113 (+)
LOC110498377 LOC106571989 coding upstream 43018 50272044 ~ 50335206 (+)
LOC110498078 LOC106572417 coding upstream 112279 50243497 ~ 50265945 (+)
iars2 iars2 coding upstream 158417 50203069 ~ 50219807 (+)
LOC110498072 NA coding upstream 209475 50163645 ~ 50168749 (+)
LOC110498081 NA coding downstream 56500 50436698 ~ 50437783 (+)
LOC118941376 NA coding downstream 134724 50514922 ~ 50516672 (+)
heatr4 heatr4 coding downstream 140197 50520395 ~ 50526363 (+)
LOC118936464 adf1 coding downstream 146743 50526941 ~ 50529343 (+)
LOC110498087 LOC106571300 coding downstream 279774 50659972 ~ 50680974 (+)
G1634794 NA non-coding upstream 25933 50352090 ~ 50352291 (+)
G1634739 NA non-coding upstream 35578 50342303 ~ 50342646 (+)
G1634734 NA non-coding upstream 47862 50330082 ~ 50330362 (+)
G1634730 NA non-coding upstream 54791 50323211 ~ 50323433 (+)
G1634821 NA non-coding downstream 15871 50396069 ~ 50396273 (+)
G1634827 NA non-coding downstream 27123 50407321 ~ 50407527 (+)
G1634828 NA non-coding downstream 28575 50408773 ~ 50409048 (+)
G1634939 LOC106571589 non-coding downstream 197472 50577670 ~ 50582425 (+)
zgc:193593 NA other upstream 1199822 49160705 ~ 49178402 (+)
G1632650 arhgef10 other upstream 1677656 48699057 ~ 48700568 (+)
LOC110498046 LOC106574720 other upstream 1700069 48588944 ~ 48678169 (+)
G1634948 NA other downstream 227188 50607386 ~ 50610479 (+)
hnrnpua hnrnpu other downstream 2194735 52561723 ~ 52576154 (+)
G1637065 NA other downstream 2370402 52750600 ~ 52755474 (+)
G1637178 NA other downstream 2537139 52917337 ~ 52918478 (+)
G1637730 NA other downstream 3049806 53430004 ~ 53430560 (+)

Expression


Co-expression Network