G1636786


Basic Information

Item Value
gene id G1636786
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 52149083 ~ 52150000 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1872577
tggaatggttTAAATGAACAAACTCCACCCATCCGGGGTACCAggccatgcaaaacaaacttgcCCATTGTTTTCTTCACAGACTGCAAATAAAGATTTGATGCTGTGTTCATCACTAAGTGGGAAGGtggtattcaaatcaaatccaattttattggtcacatacacatatttagcagatgttattgcgggtgtagaaaaatgcttaccATATACGACCGGGCCCTCCAActtcccacttggttcTGAACGAAGCATTGGCCACAATGACACACATTAGCTAATCGTCTTCACATGTCATCATACTCAGAGATTAAAAGTTGAAAATGGAGACTGTCCCGCTTCTGTTCTGACTTTTCCAACTGGCATTCTTTAACTGGTGAGCCTTGGAAAGAGACTCCTCTTTTTCAAAACATAGTCTTCAAGAACAAAACAAGGGAAAATAACAACCAACGATAACCACATCAAGCCAAAACAAGAAAAACAACAGAAGgtcgttttttttctctccccacGTGCAGATATGATATAAATACTTCAGATCCAAACAGCAAGACAGTCATCTGGACCAGCCAGACACGTGCAAATCATTTTAGAACCAAGGCTGCATC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1872577 True 611 lncRNA 0.41 2 52149083 52150000

Neighbor

gene id symbol gene type direction distance location
LOC110498093 LOC106569909 coding downstream 41558 52099849 ~ 52107525 (-)
ahctf1 ahctf1 coding downstream 62664 52047873 ~ 52086419 (-)
LOC110498090 LOC106570958 coding downstream 673383 51185057 ~ 51475700 (-)
ush2a ush2a coding downstream 977302 50685344 ~ 51171781 (-)
LOC110498086 LOC106571381 coding downstream 1492371 50644442 ~ 50656712 (-)
kif26ba LOC106569018 coding upstream 178723 52328723 ~ 52545336 (-)
efcab2 efcab2 coding upstream 401423 52551423 ~ 52561345 (-)
LOC110498101 LOC106567792 coding upstream 513563 52663563 ~ 52734555 (-)
LOC110498103 LOC106567335 coding upstream 686104 52836104 ~ 52849167 (-)
LOC110498106 LOC106567189 coding upstream 715745 52865745 ~ 52873380 (-)
G1636704 NA non-coding downstream 159059 51970962 ~ 51990024 (-)
G1636699 NA non-coding downstream 196886 51951219 ~ 51952197 (-)
G1636262 NA non-coding downstream 267029 51881837 ~ 51882054 (-)
G1636254 NA non-coding downstream 281147 51867648 ~ 51867936 (-)
G1636248 NA non-coding downstream 286744 51861977 ~ 51862339 (-)
G1636788 NA non-coding upstream 5433 52155433 ~ 52156025 (-)
G1636854 NA non-coding upstream 138654 52288654 ~ 52289963 (-)
G1636855 NA non-coding upstream 140328 52290328 ~ 52291675 (-)
G1636874 NA non-coding upstream 168195 52318195 ~ 52320093 (-)
G1636921 NA non-coding upstream 287490 52437490 ~ 52439840 (-)
G1636669 NA other downstream 250575 51896788 ~ 51898508 (-)
G1635971 NA other downstream 622663 51525986 ~ 51526420 (-)
G1635790 NA other downstream 876997 51270445 ~ 51272086 (-)
G1635484 NA other downstream 1163339 50985295 ~ 50985744 (-)
G1635456 NA other downstream 1214651 50930899 ~ 50934432 (-)
G1636861 NA other upstream 200969 52350969 ~ 52356149 (-)
G1638677 NA other upstream 1995197 54145197 ~ 54154105 (-)
G1639267 NA other upstream 2432006 54582006 ~ 54582351 (-)
G1641074 NA other upstream 3796573 55946573 ~ 55946964 (-)
G1641501 NA other upstream 4430488 56497389 ~ 56584678 (-)

Expression

G1636786 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.8.
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G1636786 Expression in each Bioproject

Bar chart with 12 bars.
G1636786 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 30.
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Co-expression Network