G1636396


Basic Information

Item Value
gene id G1636396
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 52155291 ~ 52156011 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1872124
tttctcttcctccccatAGGCTGTTTTCTATCAATTATTTATGTTGACTAGGTTAGGCCTATCTGCAGTGCATTACACATTGCATCAGACCCCACCACTCCTCTGTCCTACATAAAATCAAAtgctattagtcacatgtgccaaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagaccttacagtgaaatgcttact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1872124 True 219 lncRNA 0.40 2 52155291 52156011

Neighbor

gene id symbol gene type direction distance location
LOC110498094 LOC106569575 coding upstream 5140 52118468 ~ 52150151 (+)
tfb2m tfb2m coding upstream 37120 52107642 ~ 52118171 (+)
LOC110498384 LOC106570052 coding upstream 119405 52004125 ~ 52035886 (+)
LOC110498383 LOC106570236 coding upstream 162744 51942392 ~ 51992547 (+)
LOC110498087 LOC106571300 coding upstream 1474317 50659972 ~ 50680974 (+)
hnrnpua hnrnpu coding downstream 405712 52561723 ~ 52576154 (+)
LOC110498099 LOC106568712 coding downstream 428107 52584118 ~ 52600076 (+)
LOC110498100 LOC106568224 coding downstream 456585 52612596 ~ 52646892 (+)
LOC110498105 LOC106567684 coding downstream 639309 52795320 ~ 52835776 (+)
LOC110498109 1433b coding downstream 890234 53046245 ~ 53061764 (+)
G1636390 NA non-coding upstream 8746 52144722 ~ 52146545 (+)
G1636327 NA non-coding upstream 53563 52099568 ~ 52101728 (+)
G1636311 NA non-coding upstream 190617 51957567 ~ 51964674 (+)
G1636305 NA non-coding upstream 207138 51947494 ~ 51948153 (+)
G1636442 NA non-coding downstream 132900 52288911 ~ 52291793 (+)
G1636452 NA non-coding downstream 148674 52304685 ~ 52635036 (+)
G1636460 NA non-coding downstream 167986 52323997 ~ 52329189 (+)
G1636468 NA non-coding downstream 193593 52349604 ~ 52355243 (+)
G1636483 NA non-coding downstream 232775 52388786 ~ 52390094 (+)
G1634948 NA other upstream 1544812 50607386 ~ 50610479 (+)
LOC110498078 LOC106572417 other upstream 1900039 50243497 ~ 50265945 (+)
LOC110498072 NA other upstream 1987905 50163645 ~ 50168749 (+)
zgc:193593 NA other upstream 2976889 49160705 ~ 49178402 (+)
G1632650 arhgef10 other upstream 3454723 48699057 ~ 48700568 (+)
G1637065 NA other downstream 594589 52750600 ~ 52755474 (+)
G1637178 NA other downstream 761326 52917337 ~ 52918478 (+)
G1637730 NA other downstream 1273993 53430004 ~ 53430560 (+)
G1638710 NA other downstream 2018785 54174796 ~ 54175130 (+)

Expression


Co-expression Network