G1636442


Basic Information

Item Value
gene id G1636442
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 52288911 ~ 52291793 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1872174
AGGGGTTTAGATCGTAGTTTAAACTACTgtctagagcagagcagagagggagtcACCAGGGGTTTAGATCGTAGTTTAAACTACTGTCtaaagcagagcagagagggCGTCACCAGGGGTTTAGATCGTAGTTTAAACTACTgtctagagcagagcagagagggagtcACCAGGGGTTTAGATCGTAGTTTAAACTACTGTCTAAAGCAGAGCACAGAGGGAGTCACCAGGGGTTTAGATCGTAGTTTAAACTGCTGTCtaaagcagagcagagagggCGTCACCAGGGGTTTAGATCGTAGTTTAAACTACTGTCtaaagcagagcagagagggCGTCACCAGGGGTTTAGATCGTAGTTTAAACTACTGTCTAGAGCAGAGAGGGCGTCACCAGGGGTTTAGATCGTAGTTTAAACTACTgtctagagcagagcagagagggcgTCACCAGGGGTTTAGATCGTAGTTTAAACTACTGTCtaaagcagagcagagagggagtcACCAGGGGTTTAGATCGTAGTTTAAACTACTgtctagagcagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1872174 True 549 lncRNA 0.47 2 52288911 52291793

Neighbor

gene id symbol gene type direction distance location
LOC110498094 LOC106569575 coding upstream 138760 52118468 ~ 52150151 (+)
tfb2m tfb2m coding upstream 170740 52107642 ~ 52118171 (+)
LOC110498384 LOC106570052 coding upstream 253025 52004125 ~ 52035886 (+)
LOC110498383 LOC106570236 coding upstream 296364 51942392 ~ 51992547 (+)
LOC110498087 LOC106571300 coding upstream 1607937 50659972 ~ 50680974 (+)
hnrnpua hnrnpu coding downstream 269930 52561723 ~ 52576154 (+)
LOC110498099 LOC106568712 coding downstream 292325 52584118 ~ 52600076 (+)
LOC110498100 LOC106568224 coding downstream 320803 52612596 ~ 52646892 (+)
LOC110498105 LOC106567684 coding downstream 503527 52795320 ~ 52835776 (+)
LOC110498109 1433b coding downstream 754452 53046245 ~ 53061764 (+)
G1636396 NA non-coding upstream 132900 52155291 ~ 52156011 (+)
G1636390 NA non-coding upstream 142366 52144722 ~ 52146545 (+)
G1636327 NA non-coding upstream 187183 52099568 ~ 52101728 (+)
G1636311 NA non-coding upstream 324237 51957567 ~ 51964674 (+)
G1636452 NA non-coding downstream 12892 52304685 ~ 52635036 (+)
G1636460 NA non-coding downstream 32204 52323997 ~ 52329189 (+)
G1636468 NA non-coding downstream 57811 52349604 ~ 52355243 (+)
G1636483 NA non-coding downstream 96993 52388786 ~ 52390094 (+)
G1636602 NA non-coding downstream 367515 52659308 ~ 52661396 (+)
G1634948 NA other upstream 1678432 50607386 ~ 50610479 (+)
LOC110498078 LOC106572417 other upstream 2033659 50243497 ~ 50265945 (+)
LOC110498072 NA other upstream 2121525 50163645 ~ 50168749 (+)
zgc:193593 NA other upstream 3110509 49160705 ~ 49178402 (+)
G1632650 arhgef10 other upstream 3588343 48699057 ~ 48700568 (+)
G1637065 NA other downstream 458807 52750600 ~ 52755474 (+)
G1637178 NA other downstream 625544 52917337 ~ 52918478 (+)
G1637730 NA other downstream 1138211 53430004 ~ 53430560 (+)
G1638710 NA other downstream 1883003 54174796 ~ 54175130 (+)

Expression


Co-expression Network