G1637065


Basic Information

Item Value
gene id G1637065
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 52750600 ~ 52755474 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1872895
TTCTGTAAATCCCATCTGCAGCAATGCTGGAAAGGAATGGAAACTCAGGAATGTCCTATATGCAGATCATCAAAACACGAGCCTCTGAGCAACGAGCCTCTGAGCAACGAGCCTCTGGTTTTAAAGAACCTGTGTGAGGCCTTAGAGGAAAGGTGTCTGAGAGCTTCAGCAGGGTCCGAGCTGCTCTGCAGTCTGCACAGCGAGAAACTCAAGCTCTTCTGTCTGGACGATAAACCGCCTGTCTGCTTTGTGTGTCAGACTTCCAAAAAACACTCCTTCTGTCCCATAGATGAAGCTGCCCAGGATTATAAGGTCCTGTGATTCTGGAACCCAACACTGGTCACCCAGGTCTCCTCCTCTCTGATGATCTGACCAGTATGAGATGCATTGGAGTGACACAGAAGTTACCTGACAACCCAGAGAGGTTTGATAAATCTGACCTTGTCCTGGGCTCAGAGGGCTTTAACTCAGGGACACACAGCTGGGACATTGAGGTTGGAGATATTAAATTCTTTGCTGTAGGTGTGGCCCCAGAGTCTCCAGGGAAGGACATGGTGACTGGGTTAGAATGTGTGGAATACAGTGGTGTAATGCTGGATACAAGCCATATTTGTCCCCCACCCTATTCACACTGAAACAGAGAGCTCCTCAGAGGGTCAGAGTACAACTGAACAGGGACAGAGGAAAGCTGTCATTCTCTGACCCTGATAacaacacacacctacacacatccacacacactttCACTGAAAGAGtctttccattattttacttgaATTGGTCTACTTTCTCACATTCACTAAGAGTCTTACCAGTGAAAACCTCCGTAACAGTGGAACAGCACAACTAGAGTAGGGAGGGCGAATGAATAGGCTTCTACACAGTCATTATGAGAACTCTTTCTTAAGCTCCTGGTTAAATTGCGCATAAGAAAAAATAAACTCTCTAAATGGTTAAACCAGTAACAATTGGGGGCGAATTGCACATCTTAGTATAAAGGTTTATAGCACGATAACACAAGATCAAAACATAAAACAGATCTTTGGTTTTGTACTGTTGATTTTGTCTTATGTGCTGGGGGTCGCAGGACTCGATGTCAgtaactaggtttccatccaactgcTGACAGATGTTCATGCAATTATCCTCAAATCTGCACAAAGAAACGATGTgccttttcccaccagtggtgtgttccACCAAACAGACgtaggctgtgtgtggtgtgttccaCCAAACGGACg

Function

NR:

description
E3 ubiquitin-protein ligase TRIM39-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1872895 True 1244 TUCP 0.46 2 52750600 52755474

Neighbor

gene id symbol gene type direction distance location
LOC110498100 LOC106568224 coding upstream 103708 52612596 ~ 52646892 (+)
LOC110498099 LOC106568712 coding upstream 150524 52584118 ~ 52600076 (+)
hnrnpua hnrnpu coding upstream 174488 52561723 ~ 52576154 (+)
LOC110498094 LOC106569575 coding upstream 600449 52118468 ~ 52150151 (+)
tfb2m tfb2m coding upstream 632429 52107642 ~ 52118171 (+)
LOC110498105 LOC106567684 coding downstream 39846 52795320 ~ 52835776 (+)
LOC110498109 1433b coding downstream 290771 53046245 ~ 53061764 (+)
LOC110498110 LOC106566892 coding downstream 311343 53066817 ~ 53097965 (+)
LOC110498111 NA coding downstream 351207 53106681 ~ 53113452 (+)
LOC110498114 LOC106566507 coding downstream 504256 53259730 ~ 53342222 (+)
G1637062 NA non-coding upstream 2243 52748133 ~ 52748357 (+)
G1637061 NA non-coding upstream 3005 52747339 ~ 52747595 (+)
G1637060 NA non-coding upstream 3830 52746496 ~ 52746770 (+)
G1637059 NA non-coding upstream 5858 52741539 ~ 52744742 (+)
G1637054 LOC105030512 non-coding upstream 13855 52736442 ~ 52736745 (+)
G1637075 NA non-coding downstream 758 52756232 ~ 52758301 (+)
G1637098 NA non-coding downstream 23068 52778542 ~ 52778772 (+)
G1637105 NA non-coding downstream 33843 52789317 ~ 52789522 (+)
G1637109 LOC106567335 non-coding downstream 85472 52840946 ~ 52842487 (+)
G1637184 NA non-coding downstream 171879 52927353 ~ 52927732 (+)
G1634948 NA other upstream 2140121 50607386 ~ 50610479 (+)
LOC110498078 LOC106572417 other upstream 2495348 50243497 ~ 50265945 (+)
LOC110498072 NA other upstream 2583214 50163645 ~ 50168749 (+)
zgc:193593 NA other upstream 3572198 49160705 ~ 49178402 (+)
G1637178 NA other downstream 161863 52917337 ~ 52918478 (+)
G1637730 NA other downstream 674530 53430004 ~ 53430560 (+)
G1638710 NA other downstream 1419322 54174796 ~ 54175130 (+)
G1638780 NA other downstream 1484782 54240256 ~ 54240751 (+)
LOC110498128 LOC106610688 other downstream 2212883 54968308 ~ 54969856 (+)

Expression


Co-expression Network