G1637075


Basic Information

Item Value
gene id G1637075
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 52756232 ~ 52758301 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1872908
GTGGGGTAGGCTGTGTGGGGTAGGCTGTGGCAGTAGGCTGTGAAGGTAGGCTGTGAAGGTAGGCTGTGGGAGAAGGCTAGTTTACATGATGAGAATATTATTAATAAGGGCGAGAATATTTATTATTTgtcaacagcagtcaagcatcgaccatcatgtcatcagaataagactctggatatttattggaaaggagcatcaagctcatcaccgtgctcttacaccaccctgtgaagttcatcataacttatgatgtagcctaataaactgcatgtcTTCcagagtcatagtgggaggacctaAACACCATATcattgcgtgactccaagtttacttcgatatgatggttattatatcaatatttcaaatcaaattgtattagtcacatgcgccgaacacaacaggtgtagtagacagtgaaatgtttacttacgagcccctaactaacaatgcagttaacAATAAGAATAAGaactggtgcagctgtagaactcttTGAGGACCCAAGCCAAATCTCTCCAGTctcctgtcctgccctcttcatgactgtcttggtgtgttttggaccatgatagtttgttggtgatgtggacaccaaggaacttgaagctctcaacctgctccactacagccccattaaTGAGAACagctgaactaagctcatgaggaacttataagttatattcttcaaaaatCAATGGGCACATTTCATTAATTCAAAAGTGAACTAAATGTATGTAGCacctgcagattgcccctttaatgggTTGCAACTGAAGCAAACTTTGAATCTTGTAGGCTAATATTTTCTGTatcattatttctctctctcattacagaGTCCTCTCTAGCCACTTAGAACAACATCTTCAatccaatcaatcaaatgtatttataaatcccttcttacaacagctgatatatcaaagtgctgtacagaaacccagcctaaaacccctaacagcaagcaatgcagatgtagaagcacggtaaaAGCATACAGTATTGGTCTTGCATTGACACTGCCATCTCACAAGAGAATGACCACAGCAGGTCGTAACAGTACTGTTTGTTGTTGTTCTTGAAATTCCATATATAACCAAATGTTGTGTGCACCCCATGTTCTATAACATTGTCATGGAAAGTATATATGTTGTTTCCAATCAGCAACTATGCCCTATATCCTGCTGCATATTAAAGGATAAGGTTGCTGAAAAGCCAGTCTCTTTGGCaatgacaaggagtggaatgttagctaaagatACTGGTACTCAGGCTAGGTCTCCTTTCCCGCCAGCAGGAAAATTGGTTTCTCGAGCTAAGGTTAGTCATTTGGGGATGATTTATTTTTACATAATAGCATGCATCTTCACCAATTTAACTTTCCTGAAAGCCGCACTTTATTAGATTAAATTCACAATTTAGAAAATTAACACGGGCTACTGTTTTATGTGGGATGTAGGATCTCAAAGTGATAATGCTCTGCCTGTAGTTTGCATAATAAATAGAAAATGATCCTGAGGTGAATAAAATCATAATTACGCTGTTATATTCTCTCTATTGTCACCCAGTTTGTGTTTAATAAAGAAAATGCACAACGTCCTGACTATCACATCAACCTGTTAATTCAACCATCTTGATGAGCAACcttgacatactgtacatttgttaagggaatttttatcaatgatgactaattatgtatacatttcaatcaggactgactagtcCAAATGCTATAATGTAATGTACATATATgcattctctctcttgctcccattcccaattgtatataatatagtcaggagtttagtaacaatgacggtctgttcctttgtacaaatgaatgaactatctccagatggcagggacggactatctccagactgtctagaatgctgaTTTACAGTGACTGACCTTGGCTTTAGGAGAGGGAAGGCTCGAGAAACTATAGGGCCTCTCTACCGGTGTCATGAAAgagatagaacatttagaaagcgctgacgtcattttcagtttataacctgtggtaaaatgtgtatgtacccagtactctcttgaattaaacgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1872908 True 2070 lncRNA 0.39 1 52756232 52758301

Neighbor

gene id symbol gene type direction distance location
LOC110498100 LOC106568224 coding upstream 109340 52612596 ~ 52646892 (+)
LOC110498099 LOC106568712 coding upstream 156156 52584118 ~ 52600076 (+)
hnrnpua hnrnpu coding upstream 180120 52561723 ~ 52576154 (+)
LOC110498094 LOC106569575 coding upstream 606081 52118468 ~ 52150151 (+)
tfb2m tfb2m coding upstream 638061 52107642 ~ 52118171 (+)
LOC110498105 LOC106567684 coding downstream 37019 52795320 ~ 52835776 (+)
LOC110498109 1433b coding downstream 287944 53046245 ~ 53061764 (+)
LOC110498110 LOC106566892 coding downstream 308516 53066817 ~ 53097965 (+)
LOC110498111 NA coding downstream 348380 53106681 ~ 53113452 (+)
LOC110498114 LOC106566507 coding downstream 501429 53259730 ~ 53342222 (+)
G1637062 NA non-coding upstream 7875 52748133 ~ 52748357 (+)
G1637061 NA non-coding upstream 8637 52747339 ~ 52747595 (+)
G1637060 NA non-coding upstream 9462 52746496 ~ 52746770 (+)
G1637059 NA non-coding upstream 11490 52741539 ~ 52744742 (+)
G1637054 LOC105030512 non-coding upstream 19487 52736442 ~ 52736745 (+)
G1637098 NA non-coding downstream 20241 52778542 ~ 52778772 (+)
G1637105 NA non-coding downstream 31016 52789317 ~ 52789522 (+)
G1637109 LOC106567335 non-coding downstream 82645 52840946 ~ 52842487 (+)
G1637184 NA non-coding downstream 169052 52927353 ~ 52927732 (+)
G1637065 NA other upstream 758 52750600 ~ 52755474 (+)
G1634948 NA other upstream 2145753 50607386 ~ 50610479 (+)
LOC110498078 LOC106572417 other upstream 2500980 50243497 ~ 50265945 (+)
LOC110498072 NA other upstream 2588846 50163645 ~ 50168749 (+)
G1637178 NA other downstream 159036 52917337 ~ 52918478 (+)
G1637730 NA other downstream 671703 53430004 ~ 53430560 (+)
G1638710 NA other downstream 1416495 54174796 ~ 54175130 (+)
G1638780 NA other downstream 1481955 54240256 ~ 54240751 (+)
LOC110498128 LOC106610688 other downstream 2210056 54968308 ~ 54969856 (+)

Expression


Co-expression Network