G1637109 (LOC106567335)


Basic Information

Item Value
gene id G1637109
gene name LOC106567335
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 52840946 ~ 52842487 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1872943
CTCAGAGTGGACCTGCCAGAAGAAGTCTGGGGTGGAGGGGGCAGACTGGCTGAGCTGGGGGCTCACTTCTGTGGGGGAGTCTCCTCCAGCTCCTGGTCCTACGCCAGCGGGAGAGGGGCTGGAGGTGGAGGTGCAGGCCGGCCATGGGGTGCTGGGGGTGGAGACCCCTAGAGGTCGGGTGAGAGGCCGCGGCTCCCGCTGATGGATCTCTGTGTAGTAGAAGTCCTCCTCGCTGCAGGAGCAACGCTCATGCTCACTGACGGATGTGACGTTTAATCCCAACGACAGACTTCAGAATCTTCCCACAGTTTGGCCACAGACACCTGTAGGCCACCTTCACTGAGTTCCTGCGTTTCCGTGGTGCTGGCTCGTCAAACAGCACCTGCTCCATGTCCAATCCCTCATCAGGGGGCATGGACAGGCTGTGACCCTCTGTTTCTGTGATTGGTGGAGAGGGAGCTGGGCTTCCGTAGCCATGGTCACAGCTCCAGTAGCCACTACTTCCGCTGTCTGAGAGTTCCCCACCTCCACACTCCATACCAGCAGAACCtgCTGTGACTGTGTCTCTCTGAGGAGGGCTCGGGACCAGAGGGCTGCAGGACAGGCTGGTCAGAACCAGGGCTGCCATCATCTCATCCATAGTCTCCGCACTCCTCCTGGGCACGTCGATGCAGGAGGACATTTGGTGTGGTCTGCCTGTGCCTTGTGTCGTAGTAGAAGGTGGAGGCGGTACGGTGGGGCAGGTCCATACGTCCTCTAGTTTCCTCAGGACATGCTGTCCCAGGACAGGCAGTAGGACGGCCACCTCATTATCCACATGGTTGTGTTGCTCCACTATCCCTGTGCACTCACGCCCTCCACACAAC

Function

NR:

description
zinc finger protein 395-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1872943 True 866 lncRNA 0.60 5 52840946 52842487

Neighbor

gene id symbol gene type direction distance location
LOC110498105 LOC106567684 coding upstream 5170 52795320 ~ 52835776 (+)
LOC110498100 LOC106568224 coding upstream 194054 52612596 ~ 52646892 (+)
LOC110498099 LOC106568712 coding upstream 240870 52584118 ~ 52600076 (+)
hnrnpua hnrnpu coding upstream 264834 52561723 ~ 52576154 (+)
LOC110498094 LOC106569575 coding upstream 690795 52118468 ~ 52150151 (+)
LOC110498109 1433b coding downstream 203758 53046245 ~ 53061764 (+)
LOC110498110 LOC106566892 coding downstream 224330 53066817 ~ 53097965 (+)
LOC110498111 NA coding downstream 264194 53106681 ~ 53113452 (+)
LOC110498114 LOC106566507 coding downstream 417243 53259730 ~ 53342222 (+)
LOC110498117 LOC106566340 coding downstream 499986 53342473 ~ 53444115 (+)
G1637105 NA non-coding upstream 51424 52789317 ~ 52789522 (+)
G1637098 NA non-coding upstream 62174 52778542 ~ 52778772 (+)
G1637075 NA non-coding upstream 82645 52756232 ~ 52758301 (+)
G1637062 NA non-coding upstream 92589 52748133 ~ 52748357 (+)
G1637061 NA non-coding upstream 93351 52747339 ~ 52747595 (+)
G1637184 NA non-coding downstream 84866 52927353 ~ 52927732 (+)
G1637290 NA non-coding downstream 271893 53114380 ~ 53175260 (+)
G1637293 NA non-coding downstream 274240 53116727 ~ 53119961 (+)
G1637627 NA non-coding downstream 410292 53252779 ~ 53253015 (+)
G1637065 NA other upstream 85472 52750600 ~ 52755474 (+)
G1634948 NA other upstream 2230467 50607386 ~ 50610479 (+)
LOC110498078 LOC106572417 other upstream 2585694 50243497 ~ 50265945 (+)
LOC110498072 NA other upstream 2673560 50163645 ~ 50168749 (+)
G1637178 NA other downstream 74850 52917337 ~ 52918478 (+)
G1637730 NA other downstream 587517 53430004 ~ 53430560 (+)
G1638710 NA other downstream 1332309 54174796 ~ 54175130 (+)
G1638780 NA other downstream 1397769 54240256 ~ 54240751 (+)
LOC110498128 LOC106610688 other downstream 2125870 54968308 ~ 54969856 (+)

Expression


Co-expression Network