G1637290


Basic Information

Item Value
gene id G1637290
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 53114380 ~ 53175260 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1873143
TCCATAAACAAATATCTTCCTTATAAAACTCCCCTAGATGTGAATGTTAAGCTCAAATAACAAAAAGTTTCCCTGCTGGACAAGGATTGTCCCGACTTTCAAGAATCCctaagctaatttcctgctattttgccatgaggctgagagaaaatattgcagttttaaagctaatttcttgTAATtcttaatgtttttaaaatggcatGTGACAACGCCCCCTTTGCGGGTGTTGCGTAATACGCCAGTGGGTCACATGACTTACCCAGCATGCTCTGCAACACCtcacataaatcaaatcaaatcaaatttatttatatagctcttcgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1873143 True 388 lncRNA 0.39 2 53114380 53175260

Neighbor

gene id symbol gene type direction distance location
LOC110498111 NA coding upstream 928 53106681 ~ 53113452 (+)
LOC110498110 LOC106566892 coding upstream 16415 53066817 ~ 53097965 (+)
LOC110498109 1433b coding upstream 52616 53046245 ~ 53061764 (+)
LOC110498105 LOC106567684 coding upstream 278604 52795320 ~ 52835776 (+)
LOC110498100 LOC106568224 coding upstream 467488 52612596 ~ 52646892 (+)
LOC110498114 LOC106566507 coding downstream 84470 53259730 ~ 53342222 (+)
LOC110498117 LOC106566340 coding downstream 167213 53342473 ~ 53444115 (+)
LOC118941378 NA coding downstream 432073 53606967 ~ 53609550 (+)
LOC110498124 LOC106565365 coding downstream 1542513 54717773 ~ 54815955 (+)
LOC110498125 LOC106565054 coding downstream 1737200 54912460 ~ 54923456 (+)
G1637184 NA non-coding upstream 186648 52927353 ~ 52927732 (+)
G1637109 LOC106567335 non-coding upstream 271893 52840946 ~ 52842487 (+)
G1637105 NA non-coding upstream 324858 52789317 ~ 52789522 (+)
G1637098 NA non-coding upstream 335608 52778542 ~ 52778772 (+)
G1637627 NA non-coding downstream 77519 53252779 ~ 53253015 (+)
G1637631 NA non-coding downstream 79743 53255003 ~ 53255733 (+)
G1637710 NA non-coding downstream 226150 53401410 ~ 53401684 (+)
G1637724 NA non-coding downstream 246742 53422002 ~ 53446973 (+)
G1637178 NA other upstream 195902 52917337 ~ 52918478 (+)
G1637065 NA other upstream 358906 52750600 ~ 52755474 (+)
hnrnpua hnrnpu other upstream 538226 52561723 ~ 52576154 (+)
G1634948 NA other upstream 2503901 50607386 ~ 50610479 (+)
LOC110498078 LOC106572417 other upstream 2859128 50243497 ~ 50265945 (+)
G1637730 NA other downstream 254744 53430004 ~ 53430560 (+)
G1638710 NA other downstream 999536 54174796 ~ 54175130 (+)
G1638780 NA other downstream 1064996 54240256 ~ 54240751 (+)
LOC110498128 LOC106610688 other downstream 1793097 54968308 ~ 54969856 (+)
LOC110498153 LOC106561476 other downstream 2752388 55927603 ~ 55932079 (+)

Expression


Co-expression Network