G1637732


Basic Information

Item Value
gene id G1637732
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 53448552 ~ 53448992 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1873639
GCGTACATTTCTCTGATGGTTTTAATGTTGTTTTAAAGCCTTTCTCAATGAATTAATTTAAGAATATTAAATACGAAATCTTAGAATGATTTGTAACCATGCGTAAATTGCGCAATTACGCATCACGATGTATTAATTAAGGTGAAGGGGCTGATAAGTGTCACAATATCTTGCTTTATAGTCAAGATTAGGAGAGGTCTCGCTCTCACACAGTCCTTGACTGTCAACATAACACTACATCCTGGTGATTAATTTCATCATTATCTCTTGTTTGAAATTATGggtagcctacacacacattGAATTTCTAAAGATTCGGAAAAACTAGGAATTGTGATTGTAGGAATTGGCTATTAAAATTGCATTCCAGGGCACGGCATCAGATGTTGAATGAATACATTTGGATTGATATAATTTATCTCTACATCGGCTATGTATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1873639 True 441 lncRNA 0.34 1 53448552 53448992

Neighbor

gene id symbol gene type direction distance location
LOC110498117 LOC106566340 coding upstream 4437 53342473 ~ 53444115 (+)
LOC110498114 LOC106566507 coding upstream 106330 53259730 ~ 53342222 (+)
LOC110498111 NA coding upstream 335100 53106681 ~ 53113452 (+)
LOC110498110 LOC106566892 coding upstream 350587 53066817 ~ 53097965 (+)
LOC110498109 1433b coding upstream 386788 53046245 ~ 53061764 (+)
LOC118941378 NA coding downstream 158341 53606967 ~ 53609550 (+)
LOC110498124 LOC106565365 coding downstream 1268781 54717773 ~ 54815955 (+)
LOC110498125 LOC106565054 coding downstream 1463468 54912460 ~ 54923456 (+)
LOC110498386 htr1e coding downstream 1515843 54964835 ~ 54968539 (+)
LOC110498128 LOC106610688 coding downstream 1519316 54968308 ~ 54969856 (+)
G1637724 NA non-coding upstream 1579 53422002 ~ 53446973 (+)
G1637710 NA non-coding upstream 46868 53401410 ~ 53401684 (+)
G1637631 NA non-coding upstream 192819 53255003 ~ 53255733 (+)
G1637627 NA non-coding upstream 195537 53252779 ~ 53253015 (+)
G1637733 NA non-coding downstream 837 53449829 ~ 53450127 (+)
G1637872 NA non-coding downstream 20623 53469615 ~ 53469820 (+)
G1637901 NA non-coding downstream 79542 53528534 ~ 53528860 (+)
G1637975 NA non-coding downstream 160719 53609711 ~ 53611728 (+)
G1637730 NA other upstream 17992 53430004 ~ 53430560 (+)
G1637178 NA other upstream 530074 52917337 ~ 52918478 (+)
G1637065 NA other upstream 693078 52750600 ~ 52755474 (+)
hnrnpua hnrnpu other upstream 872398 52561723 ~ 52576154 (+)
G1634948 NA other upstream 2838073 50607386 ~ 50610479 (+)
G1638710 NA other downstream 725804 54174796 ~ 54175130 (+)
G1638780 NA other downstream 791264 54240256 ~ 54240751 (+)
LOC110498153 LOC106561476 other downstream 2478656 55927603 ~ 55932079 (+)
G1641405 NA other downstream 3051165 56500157 ~ 56505897 (+)

Expression


Co-expression Network