G1639755


Basic Information

Item Value
gene id G1639755
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 54829676 ~ 54830539 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1875790
agtcaagaggtctgaatactttccgattgccCTATATGTCCATATGGGTAGCAGTATGTCCATATGGGCAGCAGTATGTCCATACGGGTAGCAGTATGTCCATACCGGCAGCAGTATGTCCATATGGGTAGCAGTATGTCCATATGGGCAGCAGTATGTCCATACGGGCAGCAGTATGTCCATACGGGTAGCAGTATGTCCATACGGGCAGCAGTATGTCCATATGGATGGCATTATGTCCATACGGGTAGCAGTATGTCCATATGGGTAGCAGTATGTCCATATGGGCAGCAGTATGTCCATATGGGTAGCAGTATGTCCATATGGGGGGCATTATGTCCATACGGGTAGCAGTATGTCCATACGGGTAGCAGTATGTCCATATGGGTGGCATTATGTCCATATGGGTGGCATTATGTCCATATGGGCAGCAGTGTGTGCTCTCTTATCACTTACgcaagaagatgagagagaagatGTTGTTATCAATATCCAGGTTTAAGTCTTTAAAAACCACAGTGAGACAATTATTTACATCCATTGTTTTTTTTAGGAACATCCAACTATTGTGGACAGCTTAGAAATGTGCTTGGAATCATTTTGATCTTGTGCTCTGTAGCCTTTTGTTCTCAATATGCATCATAATGTTTGTATTAAATTCTGACTAGTGTGCATGCTTGCTTTAGCTACATACATTTGAAAGAGGCATTGTGGTAAAGGAATGTTTGGTAATTTTGGGTAGTTATTAAAAAAACACAAGCCACattaaaatattattttcatATGTTGGCTACTTATGTGTCCGCGTGTGTGAGTAGGACTGT

Function

NR:

description
PREDICTED: DNA-directed RNA polymerase II subunit RPB1 isoform X9

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1875790 True 824 lncRNA 0.42 2 54829676 54830539
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110498122 LOC106565612 coding downstream 119059 54704089 ~ 54710617 (-)
LOC110498121 LOC106565456 coding downstream 134337 54667402 ~ 54695339 (-)
LOC110498120 LOC106610697 coding downstream 503419 54323440 ~ 54326257 (-)
LOC118941379 NA coding downstream 713385 54110199 ~ 54116291 (-)
LOC110498119 LOC106566099 coding downstream 937623 53887090 ~ 53892053 (-)
LOC110498126 LOC106565548 coding upstream 51822 54880391 ~ 54885029 (-)
LOC110498127 LOC105929878 coding upstream 110629 54941168 ~ 54949794 (-)
trnaa-cgc-3 NA coding upstream 148979 54979518 ~ 54979587 (-)
LOC100499589 LOC100499589 coding upstream 173375 55003914 ~ 55006739 (-)
LOC110498131 LOC106564706 coding upstream 180028 55010567 ~ 55013721 (-)
LOC110498385 LOC106565104 non-coding downstream 10735 54816197 ~ 54850493 (-)
G1639724 LOC106565365 non-coding downstream 53762 54764997 ~ 54775914 (-)
G1639679 NA non-coding downstream 115572 54681975 ~ 54714104 (-)
G1639608 NA non-coding downstream 245299 54584138 ~ 54584377 (-)
G1639740 NA non-coding upstream 1121 54831660 ~ 54833122 (-)
G1639757 NA non-coding upstream 13308 54843847 ~ 54852227 (-)
G1639779 NA non-coding upstream 45434 54875973 ~ 54876245 (-)
G1639892 NA non-coding upstream 214070 55044609 ~ 55044902 (-)
G1639267 NA other downstream 247325 54582006 ~ 54582351 (-)
G1638677 NA other downstream 675571 54145197 ~ 54154105 (-)
G1636861 NA other downstream 2473527 52350969 ~ 52356149 (-)
G1636669 NA other downstream 2931168 51896788 ~ 51898508 (-)
G1635971 NA other downstream 3303256 51525986 ~ 51526420 (-)
G1641074 NA other upstream 1116034 55946573 ~ 55946964 (-)
G1641501 NA other upstream 1749949 56497389 ~ 56584678 (-)
LOC110498158 ctl2b other upstream 1960312 56790811 ~ 56794401 (-)
G1641881 NA other upstream 2153725 56984264 ~ 56984709 (-)
LOC110498390 LOC106612640 other upstream 2474187 57304724 ~ 57400864 (-)

Expression

G1639755 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.5.
End of interactive chart.

G1639755 Expression in each Bioproject

Bar chart with 6 bars.
G1639755 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network