G1639490


Basic Information

Item Value
gene id G1639490
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 54928557 ~ 54928792 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1875474
catttactcctgaggtgctgacctgttgcaccctcgacaaccactgtgattattattttttgaccctgctggtcatctatgaacatttgaacatcttggccatgttctgttataatctccacctggcacagccagaagaggactggccacccctcatagcctggttcctctctaggtttcttcctaggttctggcctttctagggagtttttcctagccaccgtgcttctacacct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1875474 True 236 lncRNA 0.48 1 54928557 54928792

Neighbor

gene id symbol gene type direction distance location
LOC110498125 LOC106565054 coding upstream 5101 54912460 ~ 54923456 (+)
LOC110498124 LOC106565365 coding upstream 112602 54717773 ~ 54815955 (+)
LOC118941378 NA coding upstream 1319007 53606967 ~ 53609550 (+)
LOC110498117 LOC106566340 coding upstream 1484442 53342473 ~ 53444115 (+)
LOC110498114 LOC106566507 coding upstream 1586335 53259730 ~ 53342222 (+)
LOC110498386 htr1e coding downstream 36043 54964835 ~ 54968539 (+)
LOC110498128 LOC106610688 coding downstream 39516 54968308 ~ 54969856 (+)
LOC110498129 LOC106564756 coding downstream 45900 54974692 ~ 54987042 (+)
orc3 orc3 coding downstream 58946 54987738 ~ 54996574 (+)
LOC110498133 LOC106563926 coding downstream 208623 55137415 ~ 55176085 (+)
G1639459 NA non-coding upstream 50102 54878067 ~ 54878455 (+)
G1639458 NA non-coding upstream 50776 54877249 ~ 54877781 (+)
G1639448 NA non-coding upstream 69004 54859115 ~ 54859553 (+)
G1639435 NA non-coding upstream 76947 54843502 ~ 54851610 (+)
G1639424 NA non-coding upstream 94338 54833105 ~ 54834219 (+)
G1639495 NA non-coding downstream 7493 54936285 ~ 54994821 (+)
G1639475 NA non-coding downstream 12416 54941208 ~ 54942492 (+)
G1639477 LOC106564860 non-coding downstream 16530 54945322 ~ 54945724 (+)
G1639522 NA non-coding downstream 75129 55003921 ~ 55004629 (+)
G1639549 NA non-coding downstream 116027 55044819 ~ 55045070 (+)
G1638780 NA other upstream 687806 54240256 ~ 54240751 (+)
G1638710 NA other upstream 753427 54174796 ~ 54175130 (+)
G1637730 NA other upstream 1497997 53430004 ~ 53430560 (+)
G1637178 NA other upstream 2010079 52917337 ~ 52918478 (+)
G1637065 NA other upstream 2173083 52750600 ~ 52755474 (+)
LOC110498153 LOC106561476 other downstream 998856 55927603 ~ 55932079 (+)
G1641405 NA other downstream 1571365 56500157 ~ 56505897 (+)
G1641407 NA other downstream 1581137 56509929 ~ 56511097 (+)
G1641713 LOC106560842 other downstream 1897160 56825952 ~ 56830309 (+)

Expression


Co-expression Network