G1639495


Basic Information

Item Value
gene id G1639495
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 54936285 ~ 54994821 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1875479
gtgatatagtgaattataagtgaaataatctgtctgtaaacaattgttggaaaaattacttgtgtcatgcacaaagtagatgtcctaaccgacttgccaaaactagtttgtttacaagaaatttgtggagcgattgaaaaacgagttttaatgactcaaacctaagtgtatgtaaacttccgacttcaactgtgtccCTTTGGGTTTATACCTCTGTAGAAACA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1875479 True 224 lncRNA 0.34 2 54936285 54994821

Neighbor

gene id symbol gene type direction distance location
LOC110498125 LOC106565054 coding upstream 12829 54912460 ~ 54923456 (+)
LOC110498124 LOC106565365 coding upstream 120330 54717773 ~ 54815955 (+)
LOC118941378 NA coding upstream 1326735 53606967 ~ 53609550 (+)
LOC110498117 LOC106566340 coding upstream 1492170 53342473 ~ 53444115 (+)
LOC110498114 LOC106566507 coding upstream 1594063 53259730 ~ 53342222 (+)
LOC110498133 LOC106563926 coding downstream 142594 55137415 ~ 55176085 (+)
LOC118941490 NA coding downstream 232032 55226853 ~ 55228876 (+)
si:ch211-15d5.11 LOC106563256 coding downstream 380714 55375535 ~ 55403366 (+)
rlf LOC106563209 coding downstream 433625 55428446 ~ 55444908 (+)
zmpste24 LOC106563167 coding downstream 459933 55454754 ~ 55459560 (+)
G1639490 NA non-coding upstream 7493 54928557 ~ 54928792 (+)
G1639459 NA non-coding upstream 57830 54878067 ~ 54878455 (+)
G1639458 NA non-coding upstream 58504 54877249 ~ 54877781 (+)
G1639448 NA non-coding upstream 76732 54859115 ~ 54859553 (+)
G1639435 NA non-coding upstream 84675 54843502 ~ 54851610 (+)
G1639522 NA non-coding downstream 9100 55003921 ~ 55004629 (+)
G1639549 NA non-coding downstream 49998 55044819 ~ 55045070 (+)
G1639550 NA non-coding downstream 50343 55045164 ~ 55045469 (+)
G1639551 NA non-coding downstream 51028 55045849 ~ 55046055 (+)
G1639554 NA non-coding downstream 54088 55048909 ~ 55049135 (+)
G1638780 NA other upstream 695534 54240256 ~ 54240751 (+)
G1638710 NA other upstream 761155 54174796 ~ 54175130 (+)
G1637730 NA other upstream 1505725 53430004 ~ 53430560 (+)
G1637178 NA other upstream 2017807 52917337 ~ 52918478 (+)
G1637065 NA other upstream 2180811 52750600 ~ 52755474 (+)
LOC110498153 LOC106561476 other downstream 932827 55927603 ~ 55932079 (+)
G1641405 NA other downstream 1505336 56500157 ~ 56505897 (+)
G1641407 NA other downstream 1515108 56509929 ~ 56511097 (+)
G1641713 LOC106560842 other downstream 1831131 56825952 ~ 56830309 (+)
G1641935 NA other downstream 2141005 57135826 ~ 57143925 (+)

Expression


Co-expression Network