Item | Value |
---|---|
gene id | G1639475 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048583.1 |
NCBI id | CM023237.2 |
chromosome length | 67237266 |
location | 54941208 ~ 54942492 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1875459 | True | 545 | lncRNA | 0.44 | 3 | 54941208 | 54942492 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110498125 | LOC106565054 | coding | upstream | 17752 | 54912460 ~ 54923456 (+) |
LOC110498124 | LOC106565365 | coding | upstream | 125253 | 54717773 ~ 54815955 (+) |
LOC118941378 | NA | coding | upstream | 1331658 | 53606967 ~ 53609550 (+) |
LOC110498117 | LOC106566340 | coding | upstream | 1497093 | 53342473 ~ 53444115 (+) |
LOC110498114 | LOC106566507 | coding | upstream | 1598986 | 53259730 ~ 53342222 (+) |
LOC110498386 | htr1e | coding | downstream | 22343 | 54964835 ~ 54968539 (+) |
LOC110498128 | LOC106610688 | coding | downstream | 25816 | 54968308 ~ 54969856 (+) |
LOC110498129 | LOC106564756 | coding | downstream | 32200 | 54974692 ~ 54987042 (+) |
orc3 | orc3 | coding | downstream | 45246 | 54987738 ~ 54996574 (+) |
LOC110498133 | LOC106563926 | coding | downstream | 194923 | 55137415 ~ 55176085 (+) |
G1639490 | NA | non-coding | upstream | 12416 | 54928557 ~ 54928792 (+) |
G1639459 | NA | non-coding | upstream | 62753 | 54878067 ~ 54878455 (+) |
G1639458 | NA | non-coding | upstream | 63427 | 54877249 ~ 54877781 (+) |
G1639448 | NA | non-coding | upstream | 81655 | 54859115 ~ 54859553 (+) |
G1639435 | NA | non-coding | upstream | 89598 | 54843502 ~ 54851610 (+) |
G1639477 | LOC106564860 | non-coding | downstream | 2830 | 54945322 ~ 54945724 (+) |
G1639522 | NA | non-coding | downstream | 61429 | 55003921 ~ 55004629 (+) |
G1639549 | NA | non-coding | downstream | 102327 | 55044819 ~ 55045070 (+) |
G1639550 | NA | non-coding | downstream | 102672 | 55045164 ~ 55045469 (+) |
G1639551 | NA | non-coding | downstream | 103357 | 55045849 ~ 55046055 (+) |
G1638780 | NA | other | upstream | 700457 | 54240256 ~ 54240751 (+) |
G1638710 | NA | other | upstream | 766078 | 54174796 ~ 54175130 (+) |
G1637730 | NA | other | upstream | 1510648 | 53430004 ~ 53430560 (+) |
G1637178 | NA | other | upstream | 2022730 | 52917337 ~ 52918478 (+) |
G1637065 | NA | other | upstream | 2185734 | 52750600 ~ 52755474 (+) |
LOC110498153 | LOC106561476 | other | downstream | 985156 | 55927603 ~ 55932079 (+) |
G1641405 | NA | other | downstream | 1557665 | 56500157 ~ 56505897 (+) |
G1641407 | NA | other | downstream | 1567437 | 56509929 ~ 56511097 (+) |
G1641713 | LOC106560842 | other | downstream | 1883460 | 56825952 ~ 56830309 (+) |