G1640188


Basic Information

Item Value
gene id G1640188
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 55327496 ~ 55327796 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1876258
ttgtatggtaataagcgatgcttgttccatattcaatgttaaagcaaaacttgtttgggtccatattaaaaggttaatttgttcaatgttggcccgtgactttgttcaggttttacattttggcccactgggtatttgagCTTGACACCCCTGCCCTAGAGGGTTAAACCttgaagacagagagataataaCAAAATAATATTCAGTGCTGTCTAATTTGAGTATAATGAAGCCTGTTTCTTTGTGATGTTCTCTGTCCTCAGATATGGAAAGCTGTGAAAGCCTGTTTGCAGATGAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1876258 True 301 lncRNA 0.38 1 55327496 55327796

Neighbor

gene id symbol gene type direction distance location
LOC118941490 NA coding upstream 98620 55226853 ~ 55228876 (+)
LOC110498133 LOC106563926 coding upstream 188468 55137415 ~ 55176085 (+)
orc3 orc3 coding upstream 330922 54987738 ~ 54996574 (+)
LOC110498129 LOC106564756 coding upstream 340454 54974692 ~ 54987042 (+)
LOC110498128 LOC106610688 coding upstream 357640 54968308 ~ 54969856 (+)
si:ch211-15d5.11 LOC106563256 coding downstream 47739 55375535 ~ 55403366 (+)
rlf LOC106563209 coding downstream 100650 55428446 ~ 55444908 (+)
zmpste24 LOC106563167 coding downstream 126958 55454754 ~ 55459560 (+)
atp5if1b LOC106563115 coding downstream 138112 55465908 ~ 55467811 (+)
rpl13a rpl13a coding downstream 141111 55468907 ~ 55472622 (+)
G1640143 NA non-coding upstream 59705 55265819 ~ 55267791 (+)
G1640141 NA non-coding upstream 65432 55261792 ~ 55262064 (+)
G1640134 NA non-coding upstream 71347 55255919 ~ 55256149 (+)
G1640023 NA non-coding upstream 98211 55229085 ~ 55229285 (+)
G1640198 NA non-coding downstream 13602 55341398 ~ 55341658 (+)
G1640199 NA non-coding downstream 14064 55341860 ~ 55342149 (+)
G1640210 NA non-coding downstream 26771 55354567 ~ 55354904 (+)
G1640241 NA non-coding downstream 85984 55413780 ~ 55414008 (+)
G1640242 NA non-coding downstream 86680 55414476 ~ 55415744 (+)
G1638780 NA other upstream 1086745 54240256 ~ 54240751 (+)
G1638710 NA other upstream 1152366 54174796 ~ 54175130 (+)
G1637730 NA other upstream 1896936 53430004 ~ 53430560 (+)
G1637178 NA other upstream 2409018 52917337 ~ 52918478 (+)
LOC110498153 LOC106561476 other downstream 599852 55927603 ~ 55932079 (+)
G1641405 NA other downstream 1172361 56500157 ~ 56505897 (+)
G1641407 NA other downstream 1182133 56509929 ~ 56511097 (+)
G1641713 LOC106560842 other downstream 1498156 56825952 ~ 56830309 (+)
G1641935 NA other downstream 1808030 57135826 ~ 57143925 (+)

Expression


Co-expression Network