G1640691


Basic Information

Item Value
gene id G1640691
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 55720836 ~ 55721162 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1876787
tagacctgcaccaggctgggaagactgaatctgcaataggtaagcagcttggtttgaagaaatcaactgtgggagcaattattaggaaatggaagacatacaagaccactgataatctccctcgatcttgggctccacgcaagatctcaccccgtggggtcaaaatgatcacaagaacggtgagcaaaaatcccagaaccacacggggggacctagtgaatgacctgcagagagctgggaccaaagtaacaaagcctaccatcagtaacactacgccgccagggactcaaatcctgcagtgccagacgtgtccccctgcttaagcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1876787 True 327 lncRNA 0.50 1 55720836 55721162

Neighbor

gene id symbol gene type direction distance location
htr1d LOC106562880 coding upstream 14108 55679068 ~ 55706728 (+)
LOC110498147 LOC106562977 coding upstream 238268 55473083 ~ 55482568 (+)
rpl13a rpl13a coding upstream 248214 55468907 ~ 55472622 (+)
kdm1a LOC106562352 coding downstream 38665 55759827 ~ 55785721 (+)
LOC110498388 LOC106561476 coding downstream 130954 55852116 ~ 55882702 (+)
LOC110498153 LOC106561476 coding downstream 206441 55927603 ~ 55932079 (+)
LOC118941493 LOC106561950 coding downstream 393007 56114169 ~ 56432709 (+)
LOC118941492 LOC106612417 coding downstream 529451 56250613 ~ 56254784 (+)
G1640411 NA non-coding upstream 202774 55517646 ~ 55518062 (+)
G1640255 NA non-coding upstream 222188 55496156 ~ 55498648 (+)
G1640257 NA non-coding upstream 252644 55467931 ~ 55468192 (+)
G1640218 NA non-coding upstream 256811 55460438 ~ 55464025 (+)
G1640247 NA non-coding upstream 298117 55422393 ~ 55422719 (+)
G1640697 NA non-coding downstream 7363 55728525 ~ 55728767 (+)
G1640730 NA non-coding downstream 67759 55788921 ~ 55794386 (+)
G1640755 NA non-coding downstream 104845 55826007 ~ 55826803 (+)
G1640789 LOC106562077 non-coding downstream 161718 55882880 ~ 55885747 (+)
G1640786 NA non-coding downstream 211573 55932735 ~ 55934404 (+)
LOC110498128 LOC106610688 other upstream 751226 54968308 ~ 54969856 (+)
G1638780 NA other upstream 1480085 54240256 ~ 54240751 (+)
G1638710 NA other upstream 1545706 54174796 ~ 54175130 (+)
G1637730 NA other upstream 2290276 53430004 ~ 53430560 (+)
G1637178 NA other upstream 2802358 52917337 ~ 52918478 (+)
G1641405 NA other downstream 778995 56500157 ~ 56505897 (+)
G1641407 NA other downstream 788767 56509929 ~ 56511097 (+)
G1641713 LOC106560842 other downstream 1104790 56825952 ~ 56830309 (+)
G1641935 NA other downstream 1414664 57135826 ~ 57143925 (+)

Expression


Co-expression Network