G1640697


Basic Information

Item Value
gene id G1640697
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 55728525 ~ 55728767 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1876798
tctctgttttctttatattttggttaggtcagggtgtgacgagggtggttacactagtttttgtattgtctagggtctTTGTATGTCTAgagttggcctgatatggttctcaatcagagacagctgtttatcgttgtctctgattggggatcatatggatcgtgggatcttgtctatgtgtagttgcctgtcagcactcattTGTATAGCGtcacgttttgttattttgttcagtgttcattc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1876798 True 243 lncRNA 0.41 1 55728525 55728767

Neighbor

gene id symbol gene type direction distance location
htr1d LOC106562880 coding upstream 21797 55679068 ~ 55706728 (+)
LOC110498147 LOC106562977 coding upstream 245957 55473083 ~ 55482568 (+)
LOC118941554 NA coding upstream 256283 55472161 ~ 55472242 (+)
LOC118941561 NA coding upstream 257103 55471351 ~ 55471422 (+)
LOC118941555 NA coding upstream 257556 55470888 ~ 55470969 (+)
kdm1a LOC106562352 coding downstream 31060 55759827 ~ 55785721 (+)
LOC110498388 LOC106561476 coding downstream 123349 55852116 ~ 55882702 (+)
LOC110498153 LOC106561476 coding downstream 198836 55927603 ~ 55932079 (+)
LOC118941493 LOC106561950 coding downstream 385402 56114169 ~ 56432709 (+)
LOC118941492 LOC106612417 coding downstream 521846 56250613 ~ 56254784 (+)
G1640691 NA non-coding upstream 7363 55720836 ~ 55721162 (+)
G1640411 NA non-coding upstream 210463 55517646 ~ 55518062 (+)
G1640255 NA non-coding upstream 229877 55496156 ~ 55498648 (+)
G1640257 NA non-coding upstream 260333 55467931 ~ 55468192 (+)
G1640218 NA non-coding upstream 264500 55460438 ~ 55464025 (+)
G1640730 NA non-coding downstream 60154 55788921 ~ 55794386 (+)
G1640755 NA non-coding downstream 97240 55826007 ~ 55826803 (+)
G1640789 LOC106562077 non-coding downstream 154113 55882880 ~ 55885747 (+)
G1640786 NA non-coding downstream 203968 55932735 ~ 55934404 (+)
G1640832 NA non-coding downstream 239063 55967830 ~ 55968118 (+)
LOC110498128 LOC106610688 other upstream 758915 54968308 ~ 54969856 (+)
G1638780 NA other upstream 1487774 54240256 ~ 54240751 (+)
G1638710 NA other upstream 1553395 54174796 ~ 54175130 (+)
G1637730 NA other upstream 2297965 53430004 ~ 53430560 (+)
G1637178 NA other upstream 2810047 52917337 ~ 52918478 (+)
G1641405 NA other downstream 771390 56500157 ~ 56505897 (+)
G1641407 NA other downstream 781162 56509929 ~ 56511097 (+)
G1641713 LOC106560842 other downstream 1097185 56825952 ~ 56830309 (+)
G1641935 NA other downstream 1407059 57135826 ~ 57143925 (+)

Expression


Co-expression Network