Gene
RNA
| Item | Value |
|---|---|
| gene id | G1640929 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 56173493 ~ 56189363 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1877065 | True | 355 | lncRNA | 0.46 | 2 | 56173493 | 56189363 |
56,164,000
56,166,000
56,168,000
56,170,000
56,172,000
56,174,000
56,176,000
56,178,000
56,180,000
56,182,000
56,184,000
56,186,000
56,188,000
56,190,000
56,192,000
56,194,000
56,196,000
56,198,000
56,200,000
NC_048583.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498153 | LOC106561476 | coding | upstream | 241414 | 55927603 ~ 55932079 (+) |
| LOC110498388 | LOC106561476 | coding | upstream | 290791 | 55852116 ~ 55882702 (+) |
| kdm1a | LOC106562352 | coding | upstream | 387772 | 55759827 ~ 55785721 (+) |
| htr1d | LOC106562880 | coding | upstream | 466765 | 55679068 ~ 55706728 (+) |
| LOC110498147 | LOC106562977 | coding | upstream | 690925 | 55473083 ~ 55482568 (+) |
| LOC118941492 | LOC106612417 | coding | downstream | 61250 | 56250613 ~ 56254784 (+) |
| LOC110498155 | LOC106561796 | coding | downstream | 255160 | 56444523 ~ 56584678 (+) |
| LOC118941494 | NA | coding | downstream | 344707 | 56534070 ~ 56538629 (+) |
| LOC110498162 | LOC106560907 | coding | downstream | 661542 | 56850905 ~ 56862683 (+) |
| LOC110498163 | LOC106610662 | coding | downstream | 869171 | 57058534 ~ 57062178 (+) |
| G1640923 | NA | non-coding | upstream | 27995 | 56145276 ~ 56145498 (+) |
| G1640864 | NA | non-coding | upstream | 131252 | 56041887 ~ 56042241 (+) |
| G1640860 | NA | non-coding | upstream | 145170 | 56028102 ~ 56028323 (+) |
| G1640835 | NA | non-coding | upstream | 166641 | 56006538 ~ 56006852 (+) |
| G1640841 | NA | non-coding | upstream | 181245 | 55990670 ~ 55992248 (+) |
| G1640940 | NA | non-coding | downstream | 19343 | 56208706 ~ 56211614 (+) |
| G1640942 | NA | non-coding | downstream | 24847 | 56214210 ~ 56214686 (+) |
| G1640952 | NA | non-coding | downstream | 37790 | 56227153 ~ 56227406 (+) |
| G1640968 | NA | non-coding | downstream | 75396 | 56264759 ~ 56264960 (+) |
| G1641221 | NA | non-coding | downstream | 80682 | 56270045 ~ 56270297 (+) |
| LOC110498128 | LOC106610688 | other | upstream | 1203883 | 54968308 ~ 54969856 (+) |
| G1638780 | NA | other | upstream | 1932742 | 54240256 ~ 54240751 (+) |
| G1638710 | NA | other | upstream | 1998363 | 54174796 ~ 54175130 (+) |
| G1637730 | NA | other | upstream | 2742933 | 53430004 ~ 53430560 (+) |
| G1641405 | NA | other | downstream | 310794 | 56500157 ~ 56505897 (+) |
| G1641407 | NA | other | downstream | 320566 | 56509929 ~ 56511097 (+) |
| G1641713 | LOC106560842 | other | downstream | 636589 | 56825952 ~ 56830309 (+) |
| G1641935 | NA | other | downstream | 946463 | 57135826 ~ 57143925 (+) |
| G1642062 | NA | other | downstream | 1085690 | 57275053 ~ 57276777 (+) |
