G1641443


Basic Information

Item Value
gene id G1641443
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 56644064 ~ 56644916 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1877644
gtgcataaggcatatgttttctccatttgcaatatgatgtcataggaagtcaaaagtcaaagtcaaaagtaaatattttcctccgtgcacctggtgatctgaaatgtgcacctggtgacctgaaatgtgcacctggtgatctaaaatatgcaactggtaacccaaaaaaaaatttttgggatgtttttttgtttatgtttccttactttttcaaagtcactgtccatttgcaatatgttttaatgggcaggtaccatcacgaatttgtcatgctcaaaattcaaactttactttgctcaaactataccttggtcaacttgtattacatatttctttttgttttacttgtgcataaggcatatgttttctccatttgcaatatgatgtcataggaagtcaaaagtcaaagtcaaaagtaaatattttcctccgtgcacctggtgatctgaaatgtgcacctggtgacctgaaatgtgcacctggtgatctaaaatatgcaactggta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1877644 True 506 lncRNA 0.36 2 56644064 56644916

Neighbor

gene id symbol gene type direction distance location
LOC110498155 LOC106561796 coding upstream 59386 56444523 ~ 56584678 (+)
LOC118941494 NA coding upstream 105435 56534070 ~ 56538629 (+)
LOC118941493 LOC106561950 coding upstream 211355 56114169 ~ 56432709 (+)
LOC118941492 LOC106612417 coding upstream 389280 56250613 ~ 56254784 (+)
LOC110498153 LOC106561476 coding upstream 711985 55927603 ~ 55932079 (+)
LOC110498162 LOC106560907 coding downstream 205989 56850905 ~ 56862683 (+)
LOC110498163 LOC106610662 coding downstream 413618 57058534 ~ 57062178 (+)
LOC110498164 LOC106609486 coding downstream 430611 57075527 ~ 57080042 (+)
LOC110511273 LOC106609620 coding downstream 441377 57086293 ~ 57088604 (+)
LOC110517953 LOC106609620 coding downstream 444153 57089069 ~ 57096631 (+)
G1641438 NA non-coding upstream 3964 56639190 ~ 56640100 (+)
G1641422 NA non-coding upstream 32523 56595343 ~ 56611541 (+)
G1641424 NA non-coding upstream 35308 56605436 ~ 56608756 (+)
G1641421 NA non-coding upstream 36563 56596215 ~ 56607501 (+)
G1641423 NA non-coding upstream 43621 56594418 ~ 56600443 (+)
G1641444 NA non-coding downstream 96 56645012 ~ 56649250 (+)
G1641561 NA non-coding downstream 14031 56658947 ~ 56659322 (+)
G1641563 NA non-coding downstream 14590 56659506 ~ 56660295 (+)
G1641571 NA non-coding downstream 21754 56666670 ~ 56668299 (+)
G1641581 NA non-coding downstream 34868 56679784 ~ 56680045 (+)
G1641407 NA other upstream 132967 56509929 ~ 56511097 (+)
G1641405 NA other upstream 138167 56500157 ~ 56505897 (+)
LOC110498128 LOC106610688 other upstream 1674454 54968308 ~ 54969856 (+)
G1638780 NA other upstream 2403313 54240256 ~ 54240751 (+)
G1641713 LOC106560842 other downstream 181036 56825952 ~ 56830309 (+)
G1641935 NA other downstream 490910 57135826 ~ 57143925 (+)
G1642062 NA other downstream 630137 57275053 ~ 57276777 (+)
G1642565 NA other downstream 1011433 57656349 ~ 57682553 (+)
G1642993 LOC106611338 other downstream 1519561 58164477 ~ 58176485 (+)

Expression


Co-expression Network