G1641561


Basic Information

Item Value
gene id G1641561
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 56658947 ~ 56659322 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1877791
gccgccagtgccgccagtcagccaggggccgccagtgccgtcagtcagccaggggccgcccgagcagctgtccctctgtcccgagcagctgtccctctgtcccgagcagctgcccctctgtcccgagcagctgccgcccctctgtcccgagctgctatcgcccctctgtcccgagctgctatcgcccctctgtcccaagctgctgccgcccctctgtcccgagcagttgtccctctgtcccgagcagctgcttcacctctgtcccgagctgcccctctgtcccgagcagcccctctgtccagtggggtcattgaaaggggtggccatggtgagtaagccagggaggcggacaataaggcggactaagacaatggtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1877791 True 376 lncRNA 0.67 1 56658947 56659322

Neighbor

gene id symbol gene type direction distance location
LOC110498155 LOC106561796 coding upstream 74269 56444523 ~ 56584678 (+)
LOC118941494 NA coding upstream 120318 56534070 ~ 56538629 (+)
LOC118941493 LOC106561950 coding upstream 226238 56114169 ~ 56432709 (+)
LOC118941492 LOC106612417 coding upstream 404163 56250613 ~ 56254784 (+)
LOC110498153 LOC106561476 coding upstream 726868 55927603 ~ 55932079 (+)
LOC110498162 LOC106560907 coding downstream 191583 56850905 ~ 56862683 (+)
LOC110498163 LOC106610662 coding downstream 399212 57058534 ~ 57062178 (+)
LOC110498164 LOC106609486 coding downstream 416205 57075527 ~ 57080042 (+)
LOC110511273 LOC106609620 coding downstream 426971 57086293 ~ 57088604 (+)
LOC110517953 LOC106609620 coding downstream 429747 57089069 ~ 57096631 (+)
G1641444 NA non-coding upstream 9697 56645012 ~ 56649250 (+)
G1641443 NA non-coding upstream 14031 56644064 ~ 56644916 (+)
G1641438 NA non-coding upstream 18847 56639190 ~ 56640100 (+)
G1641422 NA non-coding upstream 47406 56595343 ~ 56611541 (+)
G1641563 NA non-coding downstream 184 56659506 ~ 56660295 (+)
G1641571 NA non-coding downstream 7348 56666670 ~ 56668299 (+)
G1641581 NA non-coding downstream 20462 56679784 ~ 56680045 (+)
G1641584 NA non-coding downstream 36214 56695536 ~ 56695776 (+)
G1641612 NA non-coding downstream 58540 56717862 ~ 56718179 (+)
G1641407 NA other upstream 147850 56509929 ~ 56511097 (+)
G1641405 NA other upstream 153050 56500157 ~ 56505897 (+)
LOC110498128 LOC106610688 other upstream 1689337 54968308 ~ 54969856 (+)
G1638780 NA other upstream 2418196 54240256 ~ 54240751 (+)
G1641713 LOC106560842 other downstream 166630 56825952 ~ 56830309 (+)
G1641935 NA other downstream 476504 57135826 ~ 57143925 (+)
G1642062 NA other downstream 615731 57275053 ~ 57276777 (+)
G1642565 NA other downstream 997027 57656349 ~ 57682553 (+)
G1642993 LOC106611338 other downstream 1505155 58164477 ~ 58176485 (+)

Expression


Co-expression Network