G1641701


Basic Information

Item Value
gene id G1641701
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 56804066 ~ 56804409 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1877951
aaATACATGTTATTGATTGGAGCACCATGTGGGAAGGTCAAAAATCCTAGAGGTGTCTCATCCCTATTCTTTAACACAAAGCAAAGAAACAGAGACTCACAATTAGTTACTATGAAACAGATATTGAAAGTCATTGCTAGACCTTTCTTTCTGACTACTCAAGTTTGACAGACCAAGATGGTACCATATCAGGTCAGAGAAGTAATTCAGCCCCATAGTGTATGTCTCCAGGCCTTTCTCCGCCCTCTTGCTGTGTTCCATCACCATCTTCCACTTGGCCAGCCAGATCAGCTTGCGACTGGCTCCTTCCTGATGGGACTCATAGGTCTTGTCTGCAAATGCAC

Function

NR:

description
cathepsin K-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1877951 True 344 lncRNA 0.44 1 56804066 56804409

Neighbor

gene id symbol gene type direction distance location
LOC110498155 LOC106561796 coding upstream 219388 56444523 ~ 56584678 (+)
LOC118941494 NA coding upstream 265437 56534070 ~ 56538629 (+)
LOC118941493 LOC106561950 coding upstream 371357 56114169 ~ 56432709 (+)
LOC118941492 LOC106612417 coding upstream 549282 56250613 ~ 56254784 (+)
LOC110498153 LOC106561476 coding upstream 871987 55927603 ~ 55932079 (+)
LOC110498162 LOC106560907 coding downstream 46496 56850905 ~ 56862683 (+)
LOC110498163 LOC106610662 coding downstream 254125 57058534 ~ 57062178 (+)
LOC110498164 LOC106609486 coding downstream 271118 57075527 ~ 57080042 (+)
LOC110511273 LOC106609620 coding downstream 281884 57086293 ~ 57088604 (+)
LOC110517953 LOC106609620 coding downstream 284660 57089069 ~ 57096631 (+)
G1641697 NA non-coding upstream 2925 56800834 ~ 56801141 (+)
G1641694 NA non-coding upstream 6746 56797054 ~ 56797320 (+)
G1641693 NA non-coding upstream 8260 56795557 ~ 56795806 (+)
G1641692 NA non-coding upstream 12486 56790816 ~ 56791580 (+)
G1641612 NA non-coding upstream 85887 56717862 ~ 56718179 (+)
G1641712 NA non-coding downstream 19702 56824111 ~ 56824942 (+)
G1641718 NA non-coding downstream 30580 56834989 ~ 56835618 (+)
G1641732 NA non-coding downstream 55796 56860205 ~ 56860646 (+)
G1641747 NA non-coding downstream 91489 56895898 ~ 56897188 (+)
G1641407 NA other upstream 292969 56509929 ~ 56511097 (+)
G1641405 NA other upstream 298169 56500157 ~ 56505897 (+)
LOC110498128 LOC106610688 other upstream 1834456 54968308 ~ 54969856 (+)
G1638780 NA other upstream 2563315 54240256 ~ 54240751 (+)
G1641713 LOC106560842 other downstream 21543 56825952 ~ 56830309 (+)
G1641935 NA other downstream 331417 57135826 ~ 57143925 (+)
G1642062 NA other downstream 470644 57275053 ~ 57276777 (+)
G1642565 NA other downstream 851940 57656349 ~ 57682553 (+)
G1642993 LOC106611338 other downstream 1360068 58164477 ~ 58176485 (+)

Expression


Co-expression Network