G1641718


Basic Information

Item Value
gene id G1641718
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 56834989 ~ 56835618 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1877970
agccaccactatgcttcaaaaTATGGAGATAtatgtgttttattggatttgccccaaacataatactttgtattcaggacaaaacgtTCATTGTTTTGTCACATttgtttgcagtattactttagtgccctgttgcaaacaggatgcatgttttggaatatttgtattctgcacaggcttccttcttttcactctgtcaattagattagtattgtggagtaactacaatgtcattgatccatcctcagttttctcctatcacttatttaggtttgccataacaaaggggctgaatacttattgactcaagacatttcagcttttcgttttcaattaaaaaaaacataattccactttgacattatgggatattgtgtgtaggccaatgacaaaaaaaatctacatttaatccattttaaattcaggctgtaacacaacaaaatgtggaaaaagtcaaggggtgtgaatactttctgtaggcactgtatatatataatatatattctaacaaaaaaaatctcattcggggtctcaacttactgttgagagttagagtagtagaatacacaaggtgcactCACTGATGGTCTCTCAACTAGCCCATGTTAGTTAAACATTtgtagattggta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1877970 True 630 lncRNA 0.34 1 56834989 56835618

Neighbor

gene id symbol gene type direction distance location
LOC110498155 LOC106561796 coding upstream 250311 56444523 ~ 56584678 (+)
LOC118941494 NA coding upstream 296360 56534070 ~ 56538629 (+)
LOC118941493 LOC106561950 coding upstream 402280 56114169 ~ 56432709 (+)
LOC118941492 LOC106612417 coding upstream 580205 56250613 ~ 56254784 (+)
LOC110498153 LOC106561476 coding upstream 902910 55927603 ~ 55932079 (+)
LOC110498162 LOC106560907 coding downstream 15287 56850905 ~ 56862683 (+)
LOC110498163 LOC106610662 coding downstream 222916 57058534 ~ 57062178 (+)
LOC110498164 LOC106609486 coding downstream 239909 57075527 ~ 57080042 (+)
LOC110511273 LOC106609620 coding downstream 250675 57086293 ~ 57088604 (+)
LOC110517953 LOC106609620 coding downstream 253451 57089069 ~ 57096631 (+)
G1641712 NA non-coding upstream 10047 56824111 ~ 56824942 (+)
G1641701 NA non-coding upstream 30580 56804066 ~ 56804409 (+)
G1641697 NA non-coding upstream 33848 56800834 ~ 56801141 (+)
G1641694 NA non-coding upstream 37669 56797054 ~ 56797320 (+)
G1641693 NA non-coding upstream 39183 56795557 ~ 56795806 (+)
G1641732 NA non-coding downstream 24587 56860205 ~ 56860646 (+)
G1641747 NA non-coding downstream 60280 56895898 ~ 56897188 (+)
G1641749 NA non-coding downstream 63259 56898877 ~ 56906795 (+)
G1641755 NA non-coding downstream 85364 56920982 ~ 56921219 (+)
G1641713 LOC106560842 other upstream 4680 56825952 ~ 56830309 (+)
G1641407 NA other upstream 323892 56509929 ~ 56511097 (+)
G1641405 NA other upstream 329092 56500157 ~ 56505897 (+)
LOC110498128 LOC106610688 other upstream 1865379 54968308 ~ 54969856 (+)
G1641935 NA other downstream 300208 57135826 ~ 57143925 (+)
G1642062 NA other downstream 439435 57275053 ~ 57276777 (+)
G1642565 NA other downstream 820731 57656349 ~ 57682553 (+)
G1642993 LOC106611338 other downstream 1328859 58164477 ~ 58176485 (+)
LOC110498189 klhdc1 other downstream 1457718 58293310 ~ 58298259 (+)

Expression


Co-expression Network