Gene
RNA
| Item | Value |
|---|---|
| gene id | G1641747 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 56895898 ~ 56897188 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1878005 | True | 227 | lncRNA | 0.42 | 3 | 56895898 | 56897188 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498162 | LOC106560907 | coding | upstream | 33215 | 56850905 ~ 56862683 (+) |
| LOC110498155 | LOC106561796 | coding | upstream | 311220 | 56444523 ~ 56584678 (+) |
| LOC118941494 | NA | coding | upstream | 357269 | 56534070 ~ 56538629 (+) |
| LOC118941493 | LOC106561950 | coding | upstream | 463189 | 56114169 ~ 56432709 (+) |
| LOC118941492 | LOC106612417 | coding | upstream | 641114 | 56250613 ~ 56254784 (+) |
| LOC110498163 | LOC106610662 | coding | downstream | 161346 | 57058534 ~ 57062178 (+) |
| LOC110498164 | LOC106609486 | coding | downstream | 178339 | 57075527 ~ 57080042 (+) |
| LOC110511273 | LOC106609620 | coding | downstream | 189105 | 57086293 ~ 57088604 (+) |
| LOC110517953 | LOC106609620 | coding | downstream | 191881 | 57089069 ~ 57096631 (+) |
| LOC118941495 | LOC106609620 | coding | downstream | 202253 | 57099441 ~ 57102342 (+) |
| G1641732 | NA | non-coding | upstream | 35252 | 56860205 ~ 56860646 (+) |
| G1641718 | NA | non-coding | upstream | 60280 | 56834989 ~ 56835618 (+) |
| G1641712 | NA | non-coding | upstream | 70956 | 56824111 ~ 56824942 (+) |
| G1641701 | NA | non-coding | upstream | 91489 | 56804066 ~ 56804409 (+) |
| G1641749 | NA | non-coding | downstream | 1689 | 56898877 ~ 56906795 (+) |
| G1641755 | NA | non-coding | downstream | 23794 | 56920982 ~ 56921219 (+) |
| G1641756 | NA | non-coding | downstream | 25632 | 56922820 ~ 56923311 (+) |
| G1641768 | NA | non-coding | downstream | 60025 | 56957213 ~ 56957483 (+) |
| G1641774 | NA | non-coding | downstream | 69845 | 56967033 ~ 56967362 (+) |
| G1641713 | LOC106560842 | other | upstream | 65589 | 56825952 ~ 56830309 (+) |
| G1641407 | NA | other | upstream | 384801 | 56509929 ~ 56511097 (+) |
| G1641405 | NA | other | upstream | 390001 | 56500157 ~ 56505897 (+) |
| LOC110498153 | LOC106561476 | other | upstream | 965603 | 55927603 ~ 55932079 (+) |
| LOC110498128 | LOC106610688 | other | upstream | 1926288 | 54968308 ~ 54969856 (+) |
| G1641935 | NA | other | downstream | 238638 | 57135826 ~ 57143925 (+) |
| G1642062 | NA | other | downstream | 377865 | 57275053 ~ 57276777 (+) |
| G1642565 | NA | other | downstream | 759161 | 57656349 ~ 57682553 (+) |
| G1642993 | LOC106611338 | other | downstream | 1267289 | 58164477 ~ 58176485 (+) |
| LOC110498189 | klhdc1 | other | downstream | 1396148 | 58293310 ~ 58298259 (+) |
