G1641749


Basic Information

Item Value
gene id G1641749
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 56898877 ~ 56906795 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1878009
agctgcatcaggcccagtcctttaataaaccatgtagaacaagctgcaccaggccctttaataaaccatgtagaacaagctgcatcaggccctttaataaaccgtgtagaacaagctgcatcaggccctttaataaaccatgtagaacaagctgcatcaggcccttcaataaaccatgtagaacaagctgcatcaggccctttattaaaccatgtagaacaagctgcatcaggccctttaataaaccatgtagaacaagctgcatcaggccctttaataaaccatgtagaacaagctgcatcaggccctttaataaaccatgtagaacaagctgcatcaggcccagtcctttaataaaccatgtagaacaagctgcaccaggccctttaat

Function

NR:

description
PREDICTED: polysialoglycoprotein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1878009 True 391 lncRNA 0.43 2 56898877 56906795

Neighbor

gene id symbol gene type direction distance location
LOC110498162 LOC106560907 coding upstream 36194 56850905 ~ 56862683 (+)
LOC110498155 LOC106561796 coding upstream 314199 56444523 ~ 56584678 (+)
LOC118941494 NA coding upstream 360248 56534070 ~ 56538629 (+)
LOC118941493 LOC106561950 coding upstream 466168 56114169 ~ 56432709 (+)
LOC110498163 LOC106610662 coding downstream 151739 57058534 ~ 57062178 (+)
LOC110498164 LOC106609486 coding downstream 168732 57075527 ~ 57080042 (+)
LOC110511273 LOC106609620 coding downstream 179498 57086293 ~ 57088604 (+)
LOC110517953 LOC106609620 coding downstream 182274 57089069 ~ 57096631 (+)
LOC118941495 LOC106609620 coding downstream 192646 57099441 ~ 57102342 (+)
G1641747 NA non-coding upstream 1689 56895898 ~ 56897188 (+)
G1641732 NA non-coding upstream 38231 56860205 ~ 56860646 (+)
G1641718 NA non-coding upstream 63259 56834989 ~ 56835618 (+)
G1641712 NA non-coding upstream 73935 56824111 ~ 56824942 (+)
G1641755 NA non-coding downstream 14187 56920982 ~ 56921219 (+)
G1641756 NA non-coding downstream 16025 56922820 ~ 56923311 (+)
G1641768 NA non-coding downstream 50418 56957213 ~ 56957483 (+)
G1641774 NA non-coding downstream 60238 56967033 ~ 56967362 (+)
G1641864 NA non-coding downstream 66550 56973345 ~ 56973566 (+)
G1641713 LOC106560842 other upstream 68568 56825952 ~ 56830309 (+)
G1641407 NA other upstream 387780 56509929 ~ 56511097 (+)
G1641405 NA other upstream 392980 56500157 ~ 56505897 (+)
LOC110498153 LOC106561476 other upstream 968582 55927603 ~ 55932079 (+)
LOC110498128 LOC106610688 other upstream 1929267 54968308 ~ 54969856 (+)
G1641935 NA other downstream 229031 57135826 ~ 57143925 (+)
G1642062 NA other downstream 368258 57275053 ~ 57276777 (+)
G1642565 NA other downstream 749554 57656349 ~ 57682553 (+)
G1642993 LOC106611338 other downstream 1257682 58164477 ~ 58176485 (+)
LOC110498189 klhdc1 other downstream 1386541 58293310 ~ 58298259 (+)

Expression


Co-expression Network