Gene
RNA
| Item | Value |
|---|---|
| gene id | G1641878 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 56982208 ~ 56982411 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1878160 | True | 204 | lncRNA | 0.47 | 1 | 56982208 | 56982411 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498162 | LOC106560907 | coding | upstream | 119525 | 56850905 ~ 56862683 (+) |
| LOC110498155 | LOC106561796 | coding | upstream | 397530 | 56444523 ~ 56584678 (+) |
| LOC118941494 | NA | coding | upstream | 443579 | 56534070 ~ 56538629 (+) |
| LOC118941493 | LOC106561950 | coding | upstream | 549499 | 56114169 ~ 56432709 (+) |
| LOC110498163 | LOC106610662 | coding | downstream | 76123 | 57058534 ~ 57062178 (+) |
| LOC110498164 | LOC106609486 | coding | downstream | 93116 | 57075527 ~ 57080042 (+) |
| LOC110511273 | LOC106609620 | coding | downstream | 103882 | 57086293 ~ 57088604 (+) |
| LOC110517953 | LOC106609620 | coding | downstream | 106658 | 57089069 ~ 57096631 (+) |
| LOC118941495 | LOC106609620 | coding | downstream | 117030 | 57099441 ~ 57102342 (+) |
| G1641869 | NA | non-coding | upstream | 6156 | 56975749 ~ 56976052 (+) |
| G1641864 | NA | non-coding | upstream | 8642 | 56973345 ~ 56973566 (+) |
| G1641774 | NA | non-coding | upstream | 14846 | 56967033 ~ 56967362 (+) |
| G1641768 | NA | non-coding | upstream | 24725 | 56957213 ~ 56957483 (+) |
| G1641756 | NA | non-coding | upstream | 58897 | 56922820 ~ 56923311 (+) |
| G1641879 | NA | non-coding | downstream | 432 | 56982843 ~ 56983294 (+) |
| G1641883 | NA | non-coding | downstream | 3778 | 56986189 ~ 56986410 (+) |
| G1641893 | NA | non-coding | downstream | 9474 | 56991885 ~ 56992133 (+) |
| G1641904 | NA | non-coding | downstream | 27919 | 57010330 ~ 57010919 (+) |
| LOC118941498 | LOC106609620 | non-coding | downstream | 87440 | 57069851 ~ 57167057 (+) |
| G1641713 | LOC106560842 | other | upstream | 151899 | 56825952 ~ 56830309 (+) |
| G1641407 | NA | other | upstream | 471111 | 56509929 ~ 56511097 (+) |
| G1641405 | NA | other | upstream | 476311 | 56500157 ~ 56505897 (+) |
| LOC110498153 | LOC106561476 | other | upstream | 1051913 | 55927603 ~ 55932079 (+) |
| LOC110498128 | LOC106610688 | other | upstream | 2012598 | 54968308 ~ 54969856 (+) |
| G1641935 | NA | other | downstream | 153415 | 57135826 ~ 57143925 (+) |
| G1642062 | NA | other | downstream | 292642 | 57275053 ~ 57276777 (+) |
| G1642565 | NA | other | downstream | 673938 | 57656349 ~ 57682553 (+) |
| G1642993 | LOC106611338 | other | downstream | 1182066 | 58164477 ~ 58176485 (+) |
| LOC110498189 | klhdc1 | other | downstream | 1310925 | 58293310 ~ 58298259 (+) |
