Gene
RNA
| Item | Value |
|---|---|
| gene id | G1641933 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 57161279 ~ 57162259 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106533168 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1878235 | True | 912 | lncRNA | 0.50 | 2 | 57161279 | 57162259 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936466 | LOC106609620 | coding | upstream | 17161 | 57141510 ~ 57144118 (+) |
| LOC110498166 | LOC106609620 | coding | upstream | 24384 | 57113265 ~ 57136895 (+) |
| LOC118941496 | LOC106609620 | coding | upstream | 55502 | 57102972 ~ 57105777 (+) |
| LOC118941495 | LOC106609620 | coding | upstream | 58937 | 57099441 ~ 57102342 (+) |
| LOC110517953 | LOC106609620 | coding | upstream | 64648 | 57089069 ~ 57096631 (+) |
| LOC118941498 | LOC106609620 | coding | downstream | 1514 | 57069851 ~ 57167057 (+) |
| LOC110498389 | LOC106612499 | coding | downstream | 14580 | 57176839 ~ 57196955 (+) |
| LOC110498167 | LOC106612547 | coding | downstream | 52980 | 57215239 ~ 57274602 (+) |
| LOC110498392 | LOC106612959 | coding | downstream | 238498 | 57400757 ~ 57502753 (+) |
| nipal3 | nipal3 | coding | downstream | 392691 | 57554950 ~ 57563838 (+) |
| G1641904 | NA | non-coding | upstream | 150360 | 57010330 ~ 57010919 (+) |
| G1641893 | NA | non-coding | upstream | 169146 | 56991885 ~ 56992133 (+) |
| G1641883 | NA | non-coding | upstream | 174869 | 56986189 ~ 56986410 (+) |
| G1641879 | NA | non-coding | upstream | 177985 | 56982843 ~ 56983294 (+) |
| G1642100 | NA | non-coding | downstream | 110193 | 57272452 ~ 57272747 (+) |
| G1642060 | NA | non-coding | downstream | 115068 | 57277327 ~ 57278371 (+) |
| G1642101 | NA | non-coding | downstream | 117001 | 57279260 ~ 57279537 (+) |
| G1642080 | NA | non-coding | downstream | 120865 | 57283124 ~ 57315063 (+) |
| G1641935 | NA | other | upstream | 17354 | 57135826 ~ 57143925 (+) |
| G1641713 | LOC106560842 | other | upstream | 330970 | 56825952 ~ 56830309 (+) |
| G1641407 | NA | other | upstream | 650182 | 56509929 ~ 56511097 (+) |
| G1641405 | NA | other | upstream | 655382 | 56500157 ~ 56505897 (+) |
| LOC110498153 | LOC106561476 | other | upstream | 1230984 | 55927603 ~ 55932079 (+) |
| G1642062 | NA | other | downstream | 112794 | 57275053 ~ 57276777 (+) |
| G1642565 | NA | other | downstream | 494090 | 57656349 ~ 57682553 (+) |
| G1642993 | LOC106611338 | other | downstream | 1002218 | 58164477 ~ 58176485 (+) |
| LOC110498189 | klhdc1 | other | downstream | 1131077 | 58293310 ~ 58298259 (+) |
| G1644123 | NA | other | downstream | 1892264 | 59054523 ~ 59057223 (+) |
