Gene
RNA
| Item | Value |
|---|---|
| gene id | G1642060 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 57277327 ~ 57278371 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1878409 | True | 957 | lncRNA | 0.51 | 2 | 57277327 | 57278371 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498167 | LOC106612547 | coding | upstream | 2725 | 57215239 ~ 57274602 (+) |
| LOC110498389 | LOC106612499 | coding | upstream | 80372 | 57176839 ~ 57196955 (+) |
| LOC118941498 | LOC106609620 | coding | upstream | 110270 | 57069851 ~ 57167057 (+) |
| LOC118936466 | LOC106609620 | coding | upstream | 133209 | 57141510 ~ 57144118 (+) |
| LOC110498166 | LOC106609620 | coding | upstream | 140432 | 57113265 ~ 57136895 (+) |
| LOC110498392 | LOC106612959 | coding | downstream | 122386 | 57400757 ~ 57502753 (+) |
| nipal3 | nipal3 | coding | downstream | 276579 | 57554950 ~ 57563838 (+) |
| LOC110498171 | rcan3 | coding | downstream | 285906 | 57564277 ~ 57648271 (+) |
| slc25a47b | LOC106560560 | coding | downstream | 548305 | 57826676 ~ 57830485 (+) |
| LOC110498394 | NA | coding | downstream | 579499 | 57857870 ~ 57888014 (+) |
| G1642100 | NA | non-coding | upstream | 4580 | 57272452 ~ 57272747 (+) |
| G1641933 | NA | non-coding | upstream | 115068 | 57161279 ~ 57162259 (+) |
| G1642101 | NA | non-coding | downstream | 889 | 57279260 ~ 57279537 (+) |
| G1642080 | NA | non-coding | downstream | 4753 | 57283124 ~ 57315063 (+) |
| G1642195 | NA | non-coding | downstream | 159386 | 57437757 ~ 57440684 (+) |
| G1642237 | NA | non-coding | downstream | 250598 | 57528969 ~ 57529664 (+) |
| G1642268 | NA | non-coding | downstream | 327198 | 57605569 ~ 57605914 (+) |
| G1642062 | NA | other | upstream | 550 | 57275053 ~ 57276777 (+) |
| G1641935 | NA | other | upstream | 133402 | 57135826 ~ 57143925 (+) |
| G1641713 | LOC106560842 | other | upstream | 447018 | 56825952 ~ 56830309 (+) |
| G1641407 | NA | other | upstream | 766230 | 56509929 ~ 56511097 (+) |
| G1641405 | NA | other | upstream | 771430 | 56500157 ~ 56505897 (+) |
| G1642565 | NA | other | downstream | 377978 | 57656349 ~ 57682553 (+) |
| G1642993 | LOC106611338 | other | downstream | 886106 | 58164477 ~ 58176485 (+) |
| LOC110498189 | klhdc1 | other | downstream | 1014965 | 58293310 ~ 58298259 (+) |
| G1644123 | NA | other | downstream | 1776152 | 59054523 ~ 59057223 (+) |
| G1644280 | NA | other | downstream | 1918313 | 59196684 ~ 59197013 (+) |
