G1642101


Basic Information

Item Value
gene id G1642101
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 57279260 ~ 57279537 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1878459
ctagaatgtcattgtatgctgtagcattaagatttcccttcactggaacgaaggggcccagcccaaaccatgaaaaacagccctagaccactattcctcctccaccaaactttacagttggccggatgcattcgggcaggtaaaGTTCtcttggcatctgccaaacccagattcgtctgtcggactgccagatggcaaCCAGGGAGTAGAACATTCAATTGAATGAATatctacctgaaaccaaatgcCCCATGTCCTCCAACCCTACTTTACCTTAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1878459 True 278 lncRNA 0.47 1 57279260 57279537

Neighbor

gene id symbol gene type direction distance location
LOC110498167 LOC106612547 coding upstream 4658 57215239 ~ 57274602 (+)
LOC110498389 LOC106612499 coding upstream 82305 57176839 ~ 57196955 (+)
LOC118941498 LOC106609620 coding upstream 112203 57069851 ~ 57167057 (+)
LOC118936466 LOC106609620 coding upstream 135142 57141510 ~ 57144118 (+)
LOC110498166 LOC106609620 coding upstream 142365 57113265 ~ 57136895 (+)
LOC110498392 LOC106612959 coding downstream 121220 57400757 ~ 57502753 (+)
nipal3 nipal3 coding downstream 275413 57554950 ~ 57563838 (+)
LOC110498171 rcan3 coding downstream 284740 57564277 ~ 57648271 (+)
slc25a47b LOC106560560 coding downstream 547139 57826676 ~ 57830485 (+)
LOC110498394 NA coding downstream 578333 57857870 ~ 57888014 (+)
G1642060 NA non-coding upstream 889 57277327 ~ 57278371 (+)
G1642100 NA non-coding upstream 6513 57272452 ~ 57272747 (+)
G1642080 NA non-coding downstream 3587 57283124 ~ 57315063 (+)
G1642195 NA non-coding downstream 158220 57437757 ~ 57440684 (+)
G1642237 NA non-coding downstream 249432 57528969 ~ 57529664 (+)
G1642268 NA non-coding downstream 326032 57605569 ~ 57605914 (+)
G1642283 NA non-coding downstream 345964 57625501 ~ 57625762 (+)
G1642062 NA other upstream 2483 57275053 ~ 57276777 (+)
G1641935 NA other upstream 135335 57135826 ~ 57143925 (+)
G1641713 LOC106560842 other upstream 448951 56825952 ~ 56830309 (+)
G1641407 NA other upstream 768163 56509929 ~ 56511097 (+)
G1641405 NA other upstream 773363 56500157 ~ 56505897 (+)
G1642565 NA other downstream 376812 57656349 ~ 57682553 (+)
G1642993 LOC106611338 other downstream 884940 58164477 ~ 58176485 (+)
LOC110498189 klhdc1 other downstream 1013799 58293310 ~ 58298259 (+)
G1644123 NA other downstream 1774986 59054523 ~ 59057223 (+)
G1644280 NA other downstream 1917147 59196684 ~ 59197013 (+)

Expression


Co-expression Network