Gene
RNA
| Item | Value |
|---|---|
| gene id | G1642237 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 57528969 ~ 57529664 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1878627 | True | 454 | lncRNA | 0.47 | 2 | 57528969 | 57529664 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498392 | LOC106612959 | coding | upstream | 26216 | 57400757 ~ 57502753 (+) |
| LOC110498167 | LOC106612547 | coding | upstream | 254367 | 57215239 ~ 57274602 (+) |
| LOC110498389 | LOC106612499 | coding | upstream | 332014 | 57176839 ~ 57196955 (+) |
| LOC118941498 | LOC106609620 | coding | upstream | 361912 | 57069851 ~ 57167057 (+) |
| LOC118936466 | LOC106609620 | coding | upstream | 384851 | 57141510 ~ 57144118 (+) |
| nipal3 | nipal3 | coding | downstream | 25286 | 57554950 ~ 57563838 (+) |
| LOC110498171 | rcan3 | coding | downstream | 34613 | 57564277 ~ 57648271 (+) |
| slc25a47b | LOC106560560 | coding | downstream | 297012 | 57826676 ~ 57830485 (+) |
| LOC110498394 | NA | coding | downstream | 328206 | 57857870 ~ 57888014 (+) |
| LOC110498180 | dlk1 | coding | downstream | 504467 | 58034131 ~ 58040622 (+) |
| G1642195 | NA | non-coding | upstream | 88285 | 57437757 ~ 57440684 (+) |
| G1642080 | NA | non-coding | upstream | 213906 | 57283124 ~ 57315063 (+) |
| G1642101 | NA | non-coding | upstream | 249432 | 57279260 ~ 57279537 (+) |
| G1642060 | NA | non-coding | upstream | 250598 | 57277327 ~ 57278371 (+) |
| G1642100 | NA | non-coding | upstream | 256222 | 57272452 ~ 57272747 (+) |
| G1642268 | NA | non-coding | downstream | 75905 | 57605569 ~ 57605914 (+) |
| G1642283 | NA | non-coding | downstream | 95837 | 57625501 ~ 57625762 (+) |
| G1642285 | NA | non-coding | downstream | 99496 | 57629160 ~ 57629514 (+) |
| G1642579 | NA | non-coding | downstream | 140942 | 57670606 ~ 57673486 (+) |
| G1642589 | NA | non-coding | downstream | 164770 | 57694434 ~ 57694786 (+) |
| G1642062 | NA | other | upstream | 252192 | 57275053 ~ 57276777 (+) |
| G1641935 | NA | other | upstream | 385044 | 57135826 ~ 57143925 (+) |
| G1641713 | LOC106560842 | other | upstream | 698660 | 56825952 ~ 56830309 (+) |
| G1641407 | NA | other | upstream | 1017872 | 56509929 ~ 56511097 (+) |
| G1641405 | NA | other | upstream | 1023072 | 56500157 ~ 56505897 (+) |
| G1642565 | NA | other | downstream | 126685 | 57656349 ~ 57682553 (+) |
| G1642993 | LOC106611338 | other | downstream | 634813 | 58164477 ~ 58176485 (+) |
| LOC110498189 | klhdc1 | other | downstream | 763672 | 58293310 ~ 58298259 (+) |
| G1644123 | NA | other | downstream | 1524859 | 59054523 ~ 59057223 (+) |
| G1644280 | NA | other | downstream | 1667020 | 59196684 ~ 59197013 (+) |
