G1642268


Basic Information

Item Value
gene id G1642268
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 57605569 ~ 57605914 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1878659
ctgcattaccaacaaaACACTTCACAGTCTAcattaccaacaaaacacttcacacagtctgcattaccaacaaaACACTTCACTGCATTActgcattaccaacaaaACACTTCACTGCATTACTGCATTACCAACAAAACACTCTacacagtctgcattaccaaAACACTTTACTGCATTACCAACAAaacacttcacacagtctgcattaccaacaaaactcttcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1878659 True 228 lncRNA 0.38 3 57605569 57605914

Neighbor

gene id symbol gene type direction distance location
nipal3 nipal3 coding upstream 41731 57554950 ~ 57563838 (+)
LOC110498392 LOC106612959 coding upstream 102816 57400757 ~ 57502753 (+)
LOC110498167 LOC106612547 coding upstream 330967 57215239 ~ 57274602 (+)
LOC110498389 LOC106612499 coding upstream 408614 57176839 ~ 57196955 (+)
LOC118941498 LOC106609620 coding upstream 438512 57069851 ~ 57167057 (+)
slc25a47b LOC106560560 coding downstream 220762 57826676 ~ 57830485 (+)
LOC110498394 NA coding downstream 251956 57857870 ~ 57888014 (+)
LOC110498180 dlk1 coding downstream 428217 58034131 ~ 58040622 (+)
dio3a dio3 coding downstream 504596 58110510 ~ 58111944 (+)
dync1h1 dync1h1 coding downstream 587065 58192979 ~ 58248705 (+)
G1642237 NA non-coding upstream 75905 57528969 ~ 57529664 (+)
G1642195 NA non-coding upstream 164885 57437757 ~ 57440684 (+)
G1642080 NA non-coding upstream 290506 57283124 ~ 57315063 (+)
G1642101 NA non-coding upstream 326032 57279260 ~ 57279537 (+)
G1642060 NA non-coding upstream 327198 57277327 ~ 57278371 (+)
G1642283 NA non-coding downstream 19587 57625501 ~ 57625762 (+)
G1642285 NA non-coding downstream 23246 57629160 ~ 57629514 (+)
G1642579 NA non-coding downstream 64692 57670606 ~ 57673486 (+)
G1642589 NA non-coding downstream 88520 57694434 ~ 57694786 (+)
G1642593 NA non-coding downstream 96686 57702600 ~ 57703036 (+)
G1642062 NA other upstream 328792 57275053 ~ 57276777 (+)
G1641935 NA other upstream 461644 57135826 ~ 57143925 (+)
G1641713 LOC106560842 other upstream 775260 56825952 ~ 56830309 (+)
G1641407 NA other upstream 1094472 56509929 ~ 56511097 (+)
G1641405 NA other upstream 1099672 56500157 ~ 56505897 (+)
G1642565 NA other downstream 50435 57656349 ~ 57682553 (+)
G1642993 LOC106611338 other downstream 558563 58164477 ~ 58176485 (+)
LOC110498189 klhdc1 other downstream 687422 58293310 ~ 58298259 (+)
G1644123 NA other downstream 1448609 59054523 ~ 59057223 (+)
G1644280 NA other downstream 1590770 59196684 ~ 59197013 (+)

Expression


Co-expression Network