G1642565


Basic Information

Item Value
gene id G1642565
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 57656349 ~ 57682553 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1879008
CCCCAGCTACAACGGTCTCTGAGTGGACTATGCCCCCCCTCGGCTGAGGGAGTGGGTGCCAGGCGCTGCTTTTGATGCTCCTGGAAGAATGGTCTGGAACAGAACTTGACAGACAGCGGAGACAGTTAGTTGAGCAATCTGAAAAGAGGAAAAGTTGTGACAAAGGGAACTGTCTCTCACTTTATTTCCCATATACTATATCTCTACCAGTGTCTGCTGTATCTGTGAGTGAGTTGGTCACAATACTGGCTCTCAGACAAGCTAATCTGGGAGTGGGATAGAACCGAGTAGCCGAGAGGGGGGGGATCCCAGACGACTTGACGACCGCCAGGCAGCAGGATATTGTTGAAGATGACTTCAACTGTCTCACCTGAGACCAACTTCACTACAGCCGTCTCAAATACCACGACCACCACCAAGTCCAAAGAACAAATACTCACCCAGAGTTCAGGGGCTATGATTGCTGTCATCGTAATTGGTATAATTATCCTCCTAACTATACTGCTTGTCATCCTGAAGACATACAACAGGCGGACACATGCTTCCAGAGTGCTGGGTAGGGGCTCCAAAGGACCACCTCGTCAGAAGATGTCTTCCTCTACAGTGCAGACCAGCATACCCTTGGGAAATCTAGGAGCCAGCTATCTGTCTGGCAGCTTTGCTCTGTCAGAAAATGGATTCCGGCTACCCCGAGTGGAACTAAGTAGCCTGGACCAAAACAACTTGGAGCAGCAGAGTACGGGGAGCAATTCGACAGTGGTCACCATGCATGATACTCCCTCACTGGGAAATACATAGCAGGCCTCTAATTTATTGGACAGGTAACAAAGTCAGCATATCATGCTTGAAAACAAATGATGAACAAAGTGGTGCCATAGGGAGGCAATGGACATCTGTGGCCACTCCTGTGGACATAAACGACTGCTTTATTGACTATAGTGTTCAGAACATGGAAGCAATGATCCTGCTGTTATTATTATAGCTGTGCTTCCAACAACCATGAGGATAAGCATTGGAGGAGACATGTCTAGTTATTCTATGTGTGTAAAATTCTACGGGAGGGAGTTGTTGACAGGGGTTTTGAATTGATTCACATTACTCTGATGTGAGTGTGTTTTGTAACAATAATGTTGTTATGGTTTTCACCATGCAGGCGAAAATCATCAGAATGTTTCTGTGAAAAGTCAATAATAGTTTGAACCCAGTGGAGCTGTAGAAAGCAGAAAATTATGAAAATAGGAAGTCCTAACTAGTTTGCACTTTACACCTATCCTGTCCTGTAATTGTTTGGTTTgttgtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1879008 True 1300 TUCP 0.46 4 57656349 57682553

Neighbor

gene id symbol gene type direction distance location
LOC110498171 rcan3 coding upstream 8078 57564277 ~ 57648271 (+)
nipal3 nipal3 coding upstream 92511 57554950 ~ 57563838 (+)
LOC110498392 LOC106612959 coding upstream 153596 57400757 ~ 57502753 (+)
LOC110498167 LOC106612547 coding upstream 381747 57215239 ~ 57274602 (+)
LOC110498389 LOC106612499 coding upstream 459394 57176839 ~ 57196955 (+)
slc25a47b LOC106560560 coding downstream 144123 57826676 ~ 57830485 (+)
LOC110498394 NA coding downstream 175317 57857870 ~ 57888014 (+)
LOC110498180 dlk1 coding downstream 351578 58034131 ~ 58040622 (+)
dio3a dio3 coding downstream 427957 58110510 ~ 58111944 (+)
dync1h1 dync1h1 coding downstream 510426 58192979 ~ 58248705 (+)
G1642285 NA non-coding upstream 26835 57629160 ~ 57629514 (+)
G1642283 NA non-coding upstream 30587 57625501 ~ 57625762 (+)
G1642268 NA non-coding upstream 50435 57605569 ~ 57605914 (+)
G1642237 NA non-coding upstream 126685 57528969 ~ 57529664 (+)
G1642195 NA non-coding upstream 215665 57437757 ~ 57440684 (+)
G1642589 NA non-coding downstream 11881 57694434 ~ 57694786 (+)
G1642593 NA non-coding downstream 20047 57702600 ~ 57703036 (+)
G1642600 NA non-coding downstream 34401 57716954 ~ 57720177 (+)
G1642720 NA non-coding downstream 127561 57810114 ~ 57814612 (+)
G1642743 NA non-coding downstream 170304 57852857 ~ 57853179 (+)
G1642062 NA other upstream 379572 57275053 ~ 57276777 (+)
G1641935 NA other upstream 512424 57135826 ~ 57143925 (+)
G1641713 LOC106560842 other upstream 826040 56825952 ~ 56830309 (+)
G1641407 NA other upstream 1145252 56509929 ~ 56511097 (+)
G1641405 NA other upstream 1150452 56500157 ~ 56505897 (+)
G1642993 LOC106611338 other downstream 481924 58164477 ~ 58176485 (+)
LOC110498189 klhdc1 other downstream 610783 58293310 ~ 58298259 (+)
G1644123 NA other downstream 1371970 59054523 ~ 59057223 (+)
G1644280 NA other downstream 1514131 59196684 ~ 59197013 (+)
G1644569 NA other downstream 1926047 59608600 ~ 59609394 (+)

Expression


Co-expression Network