G1643645


Basic Information

Item Value
gene id G1643645
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 58833796 ~ 58834011 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1880262
AGCATATACTGTACTTGCAAACAGGAACACTTCTGGACGTATACGCATGCACATCCATGCATGTTCTCTCACACATACAAAATGCACACACGCAGACAATCAGTGTCACACACAGAGAATCAgtgtcacacacagacagacatatatgGGACACTACGCACACTAGAAAATAGTAGAGGGCTTAAGGCGTGAGAGAGGAGGCCGACATTCAAGATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1880262 True 216 lncRNA 0.45 1 58833796 58834011

Neighbor

gene id symbol gene type direction distance location
degs2 degs2 coding upstream 185044 58639045 ~ 58648752 (+)
mis18bp1 mis18bp1 coding upstream 207870 58606103 ~ 58625926 (+)
LOC110498192 LOC106610665 coding upstream 267090 58382544 ~ 58566706 (+)
dnaaf2 klhdc1 coding upstream 525622 58300100 ~ 58308174 (+)
LOC110498189 klhdc1 coding upstream 535537 58293310 ~ 58298259 (+)
disp2 disp2 coding downstream 21720 58855731 ~ 58868973 (+)
LOC110498202 LOC106608562 coding downstream 49795 58883806 ~ 58892741 (+)
prlh2r LOC106608506 coding downstream 61241 58895252 ~ 58904165 (+)
LOC110498208 LOC106608166 coding downstream 181452 59015463 ~ 59022319 (+)
LOC110498210 osr1 coding downstream 386025 59220036 ~ 59227518 (+)
G1643594 NA non-coding upstream 91914 58741508 ~ 58741882 (+)
G1643591 NA non-coding upstream 93946 58736494 ~ 58739850 (+)
G1643586 LOC106608927 non-coding upstream 111136 58718651 ~ 58722660 (+)
G1643532 NA non-coding upstream 216472 58617119 ~ 58617324 (+)
G1643530 NA non-coding upstream 220800 58612778 ~ 58612996 (+)
G1643658 NA non-coding downstream 41808 58875819 ~ 58876093 (+)
G1643659 NA non-coding downstream 42183 58876194 ~ 58876397 (+)
G1643662 NA non-coding downstream 44558 58878569 ~ 58878788 (+)
G1643669 NA non-coding downstream 67346 58901357 ~ 58901652 (+)
G1643672 NA non-coding downstream 71267 58905278 ~ 58905483 (+)
G1642993 LOC106611338 other upstream 657311 58164477 ~ 58176485 (+)
G1642565 NA other upstream 1151243 57656349 ~ 57682553 (+)
G1642062 NA other upstream 1557019 57275053 ~ 57276777 (+)
G1641935 NA other upstream 1689871 57135826 ~ 57143925 (+)
G1644123 NA other downstream 220512 59054523 ~ 59057223 (+)
G1644280 NA other downstream 362673 59196684 ~ 59197013 (+)
G1644569 NA other downstream 774589 59608600 ~ 59609394 (+)
G1644651 NA other downstream 913973 59747984 ~ 59748345 (+)
LOC110498402 LOC106604468 other downstream 1549510 60382983 ~ 60392450 (+)

Expression


Co-expression Network