G1644009


Basic Information

Item Value
gene id G1644009
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 58925760 ~ 58926052 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1880670
TAACTCCCAGTAATGGTTGGGTGAAGATGAAGACGAAGATGAAGTATCTCTGGTTGaatcacattatctggtgtaaCAGTCTGTAGCTAAGAGAACTAGTGATCAGCAGATGATGGGAGAGGTGGTCATGATGAAATTGCCAATCCAAAGAAACATACATTAAGTTCAGGGAACACTTGTTCAGCTGTGTGAGGAGTGTTGTCATGCCATTCAACTTCTCTTGGGTCATATTCTGCTTGAATTCCAGCATAATGTCCAATCCATCGAGAGGGATACAGTTCACAGGATACAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1880670 True 293 lncRNA 0.42 1 58925760 58926052

Neighbor

gene id symbol gene type direction distance location
prlh2r LOC106608506 coding upstream 21595 58895252 ~ 58904165 (+)
LOC110498202 LOC106608562 coding upstream 33019 58883806 ~ 58892741 (+)
disp2 disp2 coding upstream 56787 58855731 ~ 58868973 (+)
degs2 degs2 coding upstream 277008 58639045 ~ 58648752 (+)
mis18bp1 mis18bp1 coding upstream 299834 58606103 ~ 58625926 (+)
LOC110498208 LOC106608166 coding downstream 89411 59015463 ~ 59022319 (+)
LOC110498210 osr1 coding downstream 293984 59220036 ~ 59227518 (+)
rdh14a LOC106607934 coding downstream 556890 59482942 ~ 59488394 (+)
LOC110498214 LOC106607310 coding downstream 813506 59739558 ~ 59760715 (+)
LOC110498234 LOC106607246 coding downstream 847916 59773968 ~ 59799587 (+)
G1643672 NA non-coding upstream 20277 58905278 ~ 58905483 (+)
G1643669 NA non-coding upstream 24108 58901357 ~ 58901652 (+)
G1643662 NA non-coding upstream 46972 58878569 ~ 58878788 (+)
G1643659 NA non-coding upstream 49363 58876194 ~ 58876397 (+)
G1643658 NA non-coding upstream 49667 58875819 ~ 58876093 (+)
G1644019 NA non-coding downstream 11847 58937899 ~ 58938307 (+)
G1644035 NA non-coding downstream 27738 58953790 ~ 58954847 (+)
G1644039 NA non-coding downstream 33434 58959486 ~ 58961580 (+)
G1644058 NA non-coding downstream 41883 58967935 ~ 58968169 (+)
G1644060 NA non-coding downstream 42188 58968240 ~ 58968440 (+)
LOC110498189 klhdc1 other upstream 627525 58293310 ~ 58298259 (+)
G1642993 LOC106611338 other upstream 749275 58164477 ~ 58176485 (+)
G1642565 NA other upstream 1243207 57656349 ~ 57682553 (+)
G1642062 NA other upstream 1648983 57275053 ~ 57276777 (+)
G1641935 NA other upstream 1781835 57135826 ~ 57143925 (+)
G1644123 NA other downstream 128471 59054523 ~ 59057223 (+)
G1644280 NA other downstream 270632 59196684 ~ 59197013 (+)
G1644569 NA other downstream 682548 59608600 ~ 59609394 (+)
G1644651 NA other downstream 821932 59747984 ~ 59748345 (+)
LOC110498402 LOC106604468 other downstream 1457469 60382983 ~ 60392450 (+)

Expression


Co-expression Network