Gene
RNA
| Item | Value |
|---|---|
| gene id | G1644039 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 58959486 ~ 58961580 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1880705 | True | 381 | lncRNA | 0.44 | 2 | 58959486 | 58961580 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| prlh2r | LOC106608506 | coding | upstream | 55321 | 58895252 ~ 58904165 (+) |
| LOC110498202 | LOC106608562 | coding | upstream | 66745 | 58883806 ~ 58892741 (+) |
| disp2 | disp2 | coding | upstream | 90513 | 58855731 ~ 58868973 (+) |
| degs2 | degs2 | coding | upstream | 310734 | 58639045 ~ 58648752 (+) |
| mis18bp1 | mis18bp1 | coding | upstream | 333560 | 58606103 ~ 58625926 (+) |
| LOC110498208 | LOC106608166 | coding | downstream | 53883 | 59015463 ~ 59022319 (+) |
| LOC110498210 | osr1 | coding | downstream | 258456 | 59220036 ~ 59227518 (+) |
| rdh14a | LOC106607934 | coding | downstream | 521362 | 59482942 ~ 59488394 (+) |
| LOC110498214 | LOC106607310 | coding | downstream | 777978 | 59739558 ~ 59760715 (+) |
| LOC110498234 | LOC106607246 | coding | downstream | 812388 | 59773968 ~ 59799587 (+) |
| G1644035 | NA | non-coding | upstream | 4639 | 58953790 ~ 58954847 (+) |
| G1644019 | NA | non-coding | upstream | 21179 | 58937899 ~ 58938307 (+) |
| G1644009 | NA | non-coding | upstream | 33434 | 58925760 ~ 58926052 (+) |
| G1643672 | NA | non-coding | upstream | 54003 | 58905278 ~ 58905483 (+) |
| G1643669 | NA | non-coding | upstream | 57834 | 58901357 ~ 58901652 (+) |
| G1644058 | NA | non-coding | downstream | 6355 | 58967935 ~ 58968169 (+) |
| G1644060 | NA | non-coding | downstream | 6660 | 58968240 ~ 58968440 (+) |
| G1644062 | NA | non-coding | downstream | 7513 | 58969093 ~ 58969919 (+) |
| G1644064 | NA | non-coding | downstream | 8746 | 58970326 ~ 58970585 (+) |
| G1644074 | NA | non-coding | downstream | 29843 | 58991423 ~ 58991762 (+) |
| LOC110498189 | klhdc1 | other | upstream | 661251 | 58293310 ~ 58298259 (+) |
| G1642993 | LOC106611338 | other | upstream | 783001 | 58164477 ~ 58176485 (+) |
| G1642565 | NA | other | upstream | 1276933 | 57656349 ~ 57682553 (+) |
| G1642062 | NA | other | upstream | 1682709 | 57275053 ~ 57276777 (+) |
| G1641935 | NA | other | upstream | 1815561 | 57135826 ~ 57143925 (+) |
| G1644123 | NA | other | downstream | 92943 | 59054523 ~ 59057223 (+) |
| G1644280 | NA | other | downstream | 235104 | 59196684 ~ 59197013 (+) |
| G1644569 | NA | other | downstream | 647020 | 59608600 ~ 59609394 (+) |
| G1644651 | NA | other | downstream | 786404 | 59747984 ~ 59748345 (+) |
| LOC110498402 | LOC106604468 | other | downstream | 1421941 | 60382983 ~ 60392450 (+) |
