G1644076


Basic Information

Item Value
gene id G1644076
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 58995216 ~ 58996511 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1880743
tCTCATATTAGCCtcacggtttgttttgttgttttgtatagtttgttcagtATTCTTTCTTCATTAAAATAAGTATGTctgcttaccacgctgcgctttggtctcctccattcaacgaCCATGACAGTCTATAGATGGACTGGTAAACGGTCTATACATGGACTGCTAAATGGTCTATAGATGGACTGGTAAATGGTCTATAGATGGACTGGTAAACGGTCTATAGATGGACTGGTAAACGGTCTATAGATGGACTGGTAAATAGCCTATAGATGGACTGCTAAATGGTCTATAGATGGACTGGTAAATAGCCTATAGATGGACTGCTAAATGGTCTATAGATGGACTGGTAAATGGTCTATAGATGGACTGGTAAACGGTCTATAGATGGACTGGTAAACAGTCTATAGATGGACTGGTAAATGGTCTATAGATGGACTGGTAAATGGTCTATAGATGGACTAGTAAACAGTTTATAGACGAACTGGTAAACGGTCTATAGATGGACTGCTAAACGGTTTATAGATGGACTGGTAAACAGTCTATAGATGGACTGGTAAATGGTCTATAGATGGACTGGTAAATGGTCTATAGATGGACTAGTAAACAGTTTATAGATGGACTGGTAAATGGTCTATAGATGGACTGGTAAATGGTCTATAGATGGACTAGTAAACAGTCTATAGATGGACTAGTAAACAGTCTATAGATGGACTGCTAAATGGTCTATAGATGGACTGGTAAATAGCCTATAGATGGACTGGTAAATGGTCTATAGATGGACTGGTAAATGGTCTATAGATGGACTGGTAAACGGTTTATAGATGGACTGCTAAATGGTCTATAGATGGACTGGTAAATGGTCTATAGATGGACTGGTAAATGGTCTATAGATGGACTGGTAAACGGTTTACAGATGGACTGCAAAATGATCTATAGCCTTTGGATCCAGAGCTCTGTCTGGGGCAGAACAAAATTATGCCCAAATAGAAAAAGAAGTCCTGGCAATAGAGTTCGGACTAGAGGTTTCACCAGTATGTCTA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106600562

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1880743 True 1043 lncRNA 0.39 2 58995216 58996511

Neighbor

gene id symbol gene type direction distance location
prlh2r LOC106608506 coding upstream 91051 58895252 ~ 58904165 (+)
LOC110498202 LOC106608562 coding upstream 102475 58883806 ~ 58892741 (+)
disp2 disp2 coding upstream 126243 58855731 ~ 58868973 (+)
degs2 degs2 coding upstream 346464 58639045 ~ 58648752 (+)
mis18bp1 mis18bp1 coding upstream 369290 58606103 ~ 58625926 (+)
LOC110498208 LOC106608166 coding downstream 18952 59015463 ~ 59022319 (+)
LOC110498210 osr1 coding downstream 223525 59220036 ~ 59227518 (+)
rdh14a LOC106607934 coding downstream 486431 59482942 ~ 59488394 (+)
LOC110498214 LOC106607310 coding downstream 743047 59739558 ~ 59760715 (+)
LOC110498234 LOC106607246 coding downstream 777457 59773968 ~ 59799587 (+)
G1644074 NA non-coding upstream 3454 58991423 ~ 58991762 (+)
G1644064 NA non-coding upstream 24631 58970326 ~ 58970585 (+)
G1644062 NA non-coding upstream 25297 58969093 ~ 58969919 (+)
G1644060 NA non-coding upstream 26776 58968240 ~ 58968440 (+)
G1644058 NA non-coding upstream 27047 58967935 ~ 58968169 (+)
G1644105 NA non-coding downstream 14794 59011305 ~ 59011508 (+)
G1644139 NA non-coding downstream 67589 59064100 ~ 59064344 (+)
G1644150 NA non-coding downstream 82954 59079465 ~ 59079772 (+)
G1644157 NA non-coding downstream 89711 59086222 ~ 59086537 (+)
G1644158 NA non-coding downstream 90520 59087031 ~ 59092100 (+)
LOC110498189 klhdc1 other upstream 696981 58293310 ~ 58298259 (+)
G1642993 LOC106611338 other upstream 818731 58164477 ~ 58176485 (+)
G1642565 NA other upstream 1312663 57656349 ~ 57682553 (+)
G1642062 NA other upstream 1718439 57275053 ~ 57276777 (+)
G1641935 NA other upstream 1851291 57135826 ~ 57143925 (+)
G1644123 NA other downstream 58012 59054523 ~ 59057223 (+)
G1644280 NA other downstream 200173 59196684 ~ 59197013 (+)
G1644569 NA other downstream 612089 59608600 ~ 59609394 (+)
G1644651 NA other downstream 751473 59747984 ~ 59748345 (+)
LOC110498402 LOC106604468 other downstream 1387010 60382983 ~ 60392450 (+)

Expression


Co-expression Network