G1644123


Basic Information

Item Value
gene id G1644123
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 59054523 ~ 59057223 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1880791
GCAGGGGTTGAGTTGACGAGCTGACTCCTCCTATCTGGGCCACAGTGTAACGTAATAAGTGGTACgtttggtgtgtctgtgtgtgtgtggatgaattAAGAACCTTCACCTGTCGTATCTTTAGGTTGGTCTCCCCGTCTAAATTCGAAGTCTCGATGTAGCACATAGCATGTGGCTCGCTGGTGAAAAGAAAGTGGCCGTCAAAACAATCTAGAATGCATCTAGAATGGTGTTCACAGAAGTGATCTAACAACAGGGAAAGAGATGGGTAAGAAAATAGATCCAGGGAGAGAACAACAATGCTACAGTAGCCATAGCAACAGGGAGACAGTAAAGCACTAAACTCCAAGATGAGTGTGCTCTGTGGTCTAATAACTAGGTTTGTTATCAGTACAATAACCTAGGTAGTCCTTTGATTTTAGACAGTAACGTAAAGAGGAAGAGATGCCTGGTACAAACAGAGATCTTGCCAACATGGGGAGCAGTCCCGCTCCGCAGGATTCAAGTATGACACGGGGCATTTGGCATTTAGCATGTTCAAATAATTAAGTAGGATCCTTTCTTCCTCTTCTGTCCTTTACAACCACGTGGACTAGTAAAAAGGTGATAGGTGCAACACTGTACAAAGGGTTTGATTTCAGCCCCAATGCCAGTAGACTACAAGACCCCGACCTGGAAGCCAGCAGGACGAGGTCTGCCGGGAGGTGGTCCCCGTCACTGGCTCTGACTACATCCCCGACCGTCACCTAAGTTACCCGCAAAAGAACGTACCAGGAGCGACCAGGCAACGGTAGGGGGTGGGGACAGAAACATgggcacacaggcagacagacacattgACAAACGGAACATAGGGAACAGTCGGGGTGGGGGGGTGCGGACAGAGACATgggcacacagagacacattgacagacagaacacagggAATGtcgggaaggggagaggaagggaagaaaagAGTGAGACTACTTCAAAACAAAATATCAGAACAACTAACACAGATAGCGTGACCTACTGAAGCTAGAAGGGAACAAGAGGTTACTGAAGCCTAAAGCAGAGAGGCATAACCACAAAAAACTACCAATCTACCGTCTGTGATTCTAGCACCACCTGGAGGACAGCACGATCGAGTCTGCAGGGATGTATTCTCTCCCATTTAACGTGACTACATCTCCCACCTCTACCTGCAAAGAACACTACGGCAGTTACTAGACATTATGTAGATGAACAcacactcagcaaaaaaaatgaaacgtccccttttcaggaccctgtcgttCAAAGATGAACCTaacaatccaaataacttcacagaccttcattgtaaagggtttaaacactgtttcccatgcttgctcAATGAACcagaaacaattaatgaacatgcacctgtggaacggtcattaagacactaacagcttacagacggtatgcaattaaggtcacagttatgaaaacttaggacactaaaagaggcctttctactgactctgaaaaacaccaaaggaaagatgcccagggtccctgctcatctgcgtgaacgtgccttaggcatgctgcaaggaggcatgaggactgcagaggtggccagggaaataaattgcaatgtccatactgtgagacgcctaagacagcgctacagggagatggGACAGGACAGCTGGGACAGAcgggacagctgatcgtcctcgcagtggcagaccacgtgtaacaacacctgcacaggatcggtacatccgaacatcacacctgcgggacaggtacaggatggcaacaacatctaccaggaatgcacaatccctccatcagtgctcagactgtccgcaataggctgagagaggctggactgaaggcttgtaggcctgtcgtaaggcaggtcctcaccaaacatcataggcaacaacgtcgcctatgggcacaaacccaccgtcgctggaccagacaggactggcataaagtgctcttcactgacgagtcgcggttttgtctcaccaggggtgatggtccgATTCGCGTTATCGTCAAAGGAattagcgttacaccgaggcctgtactctggggcgggatcgatttggaggtagagggtccCTCATGGTCTGGGCCggagtgtcacagcatcatcggactgagcttgctgtcattgcaggcaatgtcaacgctgtgcattacagggaagacatcctcctccctcatgtggtacccttcctgcaggcgcatcctgacatgaccctccagcatgacaatgccaccagccatactgctcattctgtgcgtgatttcctgcatgacaggaatgtcagtgttctgccatggccaacgaagagcctggatctcaatcccgttgagcacatctgggacctgttggatcagaggggtgagggctagggccactcccaccagaaatgtctgggaaattgcaggtgccttggtggaagagtggggtaacatctcacagcaagaactggcaaatctggtgcagtccatgaggaggcaatgcactgcagtacttaatgcagctggtggccacaccagatactgactgttactttgattttga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1880791 True 2559 TUCP 0.50 2 59054523 59057223

Neighbor

gene id symbol gene type direction distance location
LOC110498208 LOC106608166 coding upstream 32204 59015463 ~ 59022319 (+)
prlh2r LOC106608506 coding upstream 150358 58895252 ~ 58904165 (+)
LOC110498202 LOC106608562 coding upstream 161782 58883806 ~ 58892741 (+)
disp2 disp2 coding upstream 185550 58855731 ~ 58868973 (+)
degs2 degs2 coding upstream 405771 58639045 ~ 58648752 (+)
LOC110498210 osr1 coding downstream 162813 59220036 ~ 59227518 (+)
rdh14a LOC106607934 coding downstream 425719 59482942 ~ 59488394 (+)
LOC110498214 LOC106607310 coding downstream 682335 59739558 ~ 59760715 (+)
LOC110498234 LOC106607246 coding downstream 716745 59773968 ~ 59799587 (+)
ankef1b LOC106609265 coding downstream 757378 59814601 ~ 59839856 (+)
G1644105 NA non-coding upstream 43015 59011305 ~ 59011508 (+)
G1644076 NA non-coding upstream 58012 58995216 ~ 58996511 (+)
G1644074 NA non-coding upstream 62761 58991423 ~ 58991762 (+)
G1644064 NA non-coding upstream 83938 58970326 ~ 58970585 (+)
G1644062 NA non-coding upstream 84604 58969093 ~ 58969919 (+)
G1644139 NA non-coding downstream 6877 59064100 ~ 59064344 (+)
G1644150 NA non-coding downstream 22242 59079465 ~ 59079772 (+)
G1644157 NA non-coding downstream 28999 59086222 ~ 59086537 (+)
G1644158 NA non-coding downstream 29808 59087031 ~ 59092100 (+)
G1644203 NA non-coding downstream 82982 59140205 ~ 59140635 (+)
LOC110498189 klhdc1 other upstream 756288 58293310 ~ 58298259 (+)
G1642993 LOC106611338 other upstream 878038 58164477 ~ 58176485 (+)
G1642565 NA other upstream 1371970 57656349 ~ 57682553 (+)
G1642062 NA other upstream 1777746 57275053 ~ 57276777 (+)
G1641935 NA other upstream 1910598 57135826 ~ 57143925 (+)
G1644280 NA other downstream 139461 59196684 ~ 59197013 (+)
G1644569 NA other downstream 551377 59608600 ~ 59609394 (+)
G1644651 NA other downstream 690761 59747984 ~ 59748345 (+)
LOC110498402 LOC106604468 other downstream 1326298 60382983 ~ 60392450 (+)
plaat1l LOC106611413 other downstream 1341684 60398860 ~ 60402461 (+)

Expression


Co-expression Network