G1644408


Basic Information

Item Value
gene id G1644408
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 59311060 ~ 59311359 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1881115
ccccagtccgaggtcctgagcgctctggagcaggttttcatcaatgatctctctatactttgctccgttcatctttgccttgatcctgactagtctcccagtccctgccgctgaacaacatccccacagcatgatgctgccaccaccatgcttcaccgtagggatattaccaccaccatgcttcaccgtagggatggtgccaggtttcctccagatgtgatgcttggcattcaggccaaagagttgaatcttggtttcatcagaccagagactattgtttctcatggtctgagagtcttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1881115 True 300 lncRNA 0.51 1 59311060 59311359

Neighbor

gene id symbol gene type direction distance location
LOC110498210 osr1 coding upstream 83542 59220036 ~ 59227518 (+)
LOC110498208 LOC106608166 coding upstream 288741 59015463 ~ 59022319 (+)
prlh2r LOC106608506 coding upstream 406895 58895252 ~ 58904165 (+)
LOC110498202 LOC106608562 coding upstream 418319 58883806 ~ 58892741 (+)
disp2 disp2 coding upstream 442087 58855731 ~ 58868973 (+)
rdh14a LOC106607934 coding downstream 171583 59482942 ~ 59488394 (+)
LOC110498214 LOC106607310 coding downstream 428199 59739558 ~ 59760715 (+)
LOC110498234 LOC106607246 coding downstream 462609 59773968 ~ 59799587 (+)
ankef1b LOC106609265 coding downstream 503242 59814601 ~ 59839856 (+)
LOC110510484 LOC106607199 coding downstream 554233 59865592 ~ 59961717 (+)
G1644383 NA non-coding upstream 22845 59287383 ~ 59288215 (+)
G1644382 NA non-coding upstream 24314 59286516 ~ 59286746 (+)
G1644371 NA non-coding upstream 31866 59278372 ~ 59279194 (+)
G1644313 NA non-coding upstream 82859 59227813 ~ 59228201 (+)
G1644304 NA non-coding upstream 96523 59214303 ~ 59214537 (+)
G1644435 NA non-coding downstream 23456 59334815 ~ 59335520 (+)
G1644514 NA non-coding downstream 164058 59475417 ~ 59475657 (+)
G1644515 NA non-coding downstream 164584 59475943 ~ 59476147 (+)
G1644520 NA non-coding downstream 178130 59489489 ~ 59493092 (+)
G1644532 NA non-coding downstream 183789 59495148 ~ 59495445 (+)
G1644280 NA other upstream 114047 59196684 ~ 59197013 (+)
G1644123 NA other upstream 253837 59054523 ~ 59057223 (+)
LOC110498189 klhdc1 other upstream 1012825 58293310 ~ 58298259 (+)
G1642993 LOC106611338 other upstream 1134575 58164477 ~ 58176485 (+)
G1642565 NA other upstream 1628507 57656349 ~ 57682553 (+)
G1644569 NA other downstream 297241 59608600 ~ 59609394 (+)
G1644651 NA other downstream 436625 59747984 ~ 59748345 (+)
LOC110498402 LOC106604468 other downstream 1072162 60382983 ~ 60392450 (+)
plaat1l LOC106611413 other downstream 1087548 60398860 ~ 60402461 (+)
chrna2a LOC103467111 other downstream 1161764 60462967 ~ 60475546 (+)

Expression


Co-expression Network