G1644435


Basic Information

Item Value
gene id G1644435
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 59334815 ~ 59335520 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1881143
aaatgtatttatatagcccttcgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggctaggaaaaactccctagaaaggccaaaagatgttcaaatgttcataaatgaccagcatggtcaaataataataaggcagaacagttgaaactggagcagcagcacggtcaggtggactggggacagcaaggagtcatcatgtcaggtagtcctggggcatggtcctagggctcaggtcctccgagagagagaaagaaagagagaaggagagaataagagaacgcacacttagattcacacaggacaccgaataggacaggagaagtactccagatataacaaactgaccctagccccccgacacataaactactgcagcataaatactggaggctgagacagga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1881143 True 454 lncRNA 0.46 2 59334815 59335520

Neighbor

gene id symbol gene type direction distance location
LOC110498210 osr1 coding upstream 107297 59220036 ~ 59227518 (+)
LOC110498208 LOC106608166 coding upstream 312496 59015463 ~ 59022319 (+)
prlh2r LOC106608506 coding upstream 430650 58895252 ~ 58904165 (+)
LOC110498202 LOC106608562 coding upstream 442074 58883806 ~ 58892741 (+)
disp2 disp2 coding upstream 465842 58855731 ~ 58868973 (+)
rdh14a LOC106607934 coding downstream 147422 59482942 ~ 59488394 (+)
LOC110498214 LOC106607310 coding downstream 404038 59739558 ~ 59760715 (+)
LOC110498234 LOC106607246 coding downstream 438448 59773968 ~ 59799587 (+)
ankef1b LOC106609265 coding downstream 479081 59814601 ~ 59839856 (+)
LOC110510484 LOC106607199 coding downstream 530072 59865592 ~ 59961717 (+)
G1644408 NA non-coding upstream 23456 59311060 ~ 59311359 (+)
G1644383 NA non-coding upstream 46600 59287383 ~ 59288215 (+)
G1644382 NA non-coding upstream 48069 59286516 ~ 59286746 (+)
G1644371 NA non-coding upstream 55621 59278372 ~ 59279194 (+)
G1644313 NA non-coding upstream 106614 59227813 ~ 59228201 (+)
G1644514 NA non-coding downstream 139897 59475417 ~ 59475657 (+)
G1644515 NA non-coding downstream 140423 59475943 ~ 59476147 (+)
G1644520 NA non-coding downstream 153969 59489489 ~ 59493092 (+)
G1644532 NA non-coding downstream 159628 59495148 ~ 59495445 (+)
G1644533 NA non-coding downstream 160089 59495609 ~ 59495813 (+)
G1644280 NA other upstream 137802 59196684 ~ 59197013 (+)
G1644123 NA other upstream 277592 59054523 ~ 59057223 (+)
LOC110498189 klhdc1 other upstream 1036580 58293310 ~ 58298259 (+)
G1642993 LOC106611338 other upstream 1158330 58164477 ~ 58176485 (+)
G1642565 NA other upstream 1652262 57656349 ~ 57682553 (+)
G1644569 NA other downstream 273080 59608600 ~ 59609394 (+)
G1644651 NA other downstream 412464 59747984 ~ 59748345 (+)
LOC110498402 LOC106604468 other downstream 1048001 60382983 ~ 60392450 (+)
plaat1l LOC106611413 other downstream 1063387 60398860 ~ 60402461 (+)
chrna2a LOC103467111 other downstream 1137603 60462967 ~ 60475546 (+)

Expression


Co-expression Network