G1644539


Basic Information

Item Value
gene id G1644539
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 59502003 ~ 59502299 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1881263
CTTGAatggggcggcagtggttagagcgttggactagtaaccagaaggttgcaagttcaaatctccgagctgacaaagtacaaatctgtcgttctgcccctgaacaggcagttaacccactgttcctaggccgtcattataaaaaataagaatttgttcttaactgacttgcctagtaaaataaaggtaaaattaaaattaaataaaaaaatatgcatgAGTCCCCAGACTCCAGGCGACATGGGTACGAATCTCGTCTCCCCTCTTCTTTCTGACTATCACTGTCCATAAAACAAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1881263 True 297 lncRNA 0.41 1 59502003 59502299

Neighbor

gene id symbol gene type direction distance location
rdh14a LOC106607934 coding upstream 13609 59482942 ~ 59488394 (+)
LOC110498210 osr1 coding upstream 274485 59220036 ~ 59227518 (+)
LOC110498208 LOC106608166 coding upstream 479684 59015463 ~ 59022319 (+)
prlh2r LOC106608506 coding upstream 597838 58895252 ~ 58904165 (+)
LOC110498202 LOC106608562 coding upstream 609262 58883806 ~ 58892741 (+)
LOC110498214 LOC106607310 coding downstream 237259 59739558 ~ 59760715 (+)
LOC110498234 LOC106607246 coding downstream 271669 59773968 ~ 59799587 (+)
ankef1b LOC106609265 coding downstream 312302 59814601 ~ 59839856 (+)
LOC110510484 LOC106607199 coding downstream 363293 59865592 ~ 59961717 (+)
LOC110498222 LOC106603387 coding downstream 494226 59996525 ~ 60022616 (+)
G1644534 NA non-coding upstream 5504 59496233 ~ 59496499 (+)
G1644533 NA non-coding upstream 6190 59495609 ~ 59495813 (+)
G1644532 NA non-coding upstream 6558 59495148 ~ 59495445 (+)
G1644520 NA non-coding upstream 8911 59489489 ~ 59493092 (+)
G1644515 NA non-coding upstream 25856 59475943 ~ 59476147 (+)
G1644547 NA non-coding downstream 17806 59520105 ~ 59520806 (+)
G1644551 NA non-coding downstream 34042 59536341 ~ 59536647 (+)
G1644518 NA non-coding downstream 40431 59542730 ~ 59595237 (+)
G1644521 NA non-coding downstream 46371 59548670 ~ 59551972 (+)
G1644524 NA non-coding downstream 84229 59586528 ~ 59597541 (+)
G1644280 NA other upstream 304990 59196684 ~ 59197013 (+)
G1644123 NA other upstream 444780 59054523 ~ 59057223 (+)
LOC110498189 klhdc1 other upstream 1203768 58293310 ~ 58298259 (+)
G1642993 LOC106611338 other upstream 1325518 58164477 ~ 58176485 (+)
G1642565 NA other upstream 1819450 57656349 ~ 57682553 (+)
G1644569 NA other downstream 106301 59608600 ~ 59609394 (+)
G1644651 NA other downstream 245685 59747984 ~ 59748345 (+)
LOC110498402 LOC106604468 other downstream 881222 60382983 ~ 60392450 (+)
plaat1l LOC106611413 other downstream 896608 60398860 ~ 60402461 (+)
chrna2a LOC103467111 other downstream 970824 60462967 ~ 60475546 (+)

Expression


Co-expression Network